Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1551 ATGACCACCACCACCGCTACCACTTCTTCTCAGATCCTTCGACACACCACCGCCTTCCTCTCCGACGTCCTTTCGCATTCCCAACTCCTACGCCGCCTCATTTCTACCCTCCTTCGCGACTCTTCAATCTCCAACCAAATCACCCTCAAACAGCTCAATCTCGCCGCCAACACCCTCAATAATGCTATCTCTGTCTCCAGCCCTTCCATCCGATCCTCCTCCCTCACACTCGCCGAGAAGCTCCTCCTCCCTCTCCCTCAGAATCCCATTTCATCTTTCCTTCTTTCTCTCATATACACGATCAACAAACGACAAGTCGAAGCCGCCATAAGTATCCTTCAAGTCTTCTATTTAACCCCTTCATTGGCCCGATCGGAAATCGCTCCGTTTCTCTACGAGCAGCTGTTTTCTCTCCACCTCCTCCCAGTTTTCCGATCCTTCGATGAACAGAGAGCAAAAATACTGCCATCTACGTCGGCAAATTCGGCACGCTATCCAGATGATTATTCAATTTTTGATGAATCGGTTGTCTTACCCTACACGAAATTGTTGTCACGGATGAGCGACGACCAAGCCTCGAAGCTGAGGGAATTGGAGAGAGACTACGAAGAGGCTATTGATGACACTTGCAGGATTGTTGCCGAGTACTTCAAAGCAGTTTTGATGAATAATACCAGCGACTCATCAATTAGTCCGCCATTGTCGGTTCAGAAGAACAGTAGAGATGATGCAGAAATGGAGCATAGTGAAGAGGAGATAGTGGAAACAGAAATGCCTTTGTTTAAGAACGGACGGTATAATCCAATTTGGACTGAAAGGGAAGCGTCTATTGAATTTTCGAGTATCAGTTTCAGCGCAAAGTATTTGAATGCACCGTTTTACCCTCAAAGAGTCTCTCCTAAAATCCTCAAACACCAAGAATCTTCTAAAAAACTGTCCTTACCATCCCGTTCATACATAGACGCTGAAACTGATCATGAGTCTTCAGATGAAAATATGCCTTGTTATTCGTCAGAATCTGAGGCAGAAACTAAGGACAAAGACACGATGGTACCATTGGAGACTCGACGAAGCCAAATCCAAGAATCAGTGCAAATTGGTATTGCAGAACCCGGAGGTTCCCCAGATTATACCATGGCAGATTATGATCACCAGCCGCCTGGAAATGGAAAAAGTACGCCTCCCAAGGACTTTGTCTGTCCAATAACTGGCAATCTATTTGATGATCCAGTGACTCTTGAGACAGGACAGACATATGAAAGGAAAGCTATCGAAGAATGGTTCAACAGGGGAAACTCAACCTGTCCAATCACTCGCCAGGAGCTGCAAAATACCCAGCTGCCTAAAACAAATTATGTGCTCAAACGACTAATTGCAAGCTGGAAAGAACAGAATCCCAATTCAATCCCATCTCCATCTCCATCTGAGAGTCTACATACTGAAACTGAGGTACCAATCAAGTCAACGACGCCTTCAACTTCTCCTAATAGTGTCATAACTCAAGCCAATGTTGATGGGATGATTGGTGAGTTACGGCATGCAATTAACAACCTGTATATGTCAGAGATCCTCGAGGAGTCAGAAATGGCTGTGCTTCAAATTGAGCAATCTTGGAAAGAATTAAACCTGGCAGTGGATATCCAGACCATGTTATCAAAACCTCCGATCATTAATGGGTTCATGGAGATTCTATTTAATTCTGTTGATCCCCAGGTGCTTCAAGCAACAGTTTTTCTTCTGGCCGAGATGGGTTCTAGGGACAATGCTGTTATTCAGACGCTTACTCGAGTGGACTCTGATGTAGAATGTATTATGGCGCTTTTCAAGAATGGCTTGACAGAGGCTATTGTATTGATATATCTCCTGAAGCCTTCTACTACTGCTCTTGCAGAAATGGCCATATTGGAGTCTCTCGTAACAGTTTTCAATAAGAAAGAGGAGGACTTGCTTAAGATGTGCATAAAGCCCAAGTCAGCGGCGGTACTTATACTGGCACAGATTCTTGGAAGCAATGAGGAGAGAATTGCATCTTCAGTAGCCAAGACTTTGATAAATGGTAGAGTAATTGAATGTATATTTGGCAGTTTTCGAGCTGGGTGGGCAGAGGAGAGGATTGCTGCACTGGAGATCTTATTAAGATGCATCCAGGAGGATGGAACTTGCAGGCATCTCATTGCTGAAAAAGTTGAGCTGTCTCCCATTTTGGAAAGCTTTATTGGGGCGAATGGTGTAGAACGTTTTAAGACAGTCCAATTTTGCTCTGATTTAATCAAATTAAATAGGACATTGAATGAACAAATCCTTCACATTATAAAGGAAGAAGGTGCTTTCAGTACAATGCACACTTTCCTCGTTTATATGCAGACATCCCTTCAAGATCAATGTCCAGTTGTGGCTGGCCTCTTACTCCAACTTGATCTTCTGGTAGAACCAAGAAAGATGAGTATATACCGTGAAGAAGCTATAGATACTCTTATTTCATGCCTCAGAAACAATGATTTCTCGGCTACCCAAGTAGTAGCTGCTGAGACAATAGTGTCATTGCAAGGGAGATTCAACTTCGCTGGAAAGCCTCTTATGAGAGAAGTCCTTCTCAAACGTGCTGGCTTTAACAGAAATCGTAGAAGTCTTGATCAGATGGATCATATTAGCAATATCAGTGGAGAACTTGAAACGGATCCAGAAGAAGAGAAGGCAGCTGATGACTGGGAGAGAAAAATTGCGTCTGTTTTAGTTGGCCATGAGTTTGGTCTACTTTTTGAGGCTTTAGCTGAAGGCCTGAAAAGCCGAAGTACACAACTAAGTTCAGCATGCTTTATATCAGCCACGTGGCTTACATACATGCTTACCATTCTACCAGATACAGGAATACGAGGAGCAGCCTGTGTCTGCTTGCTCAAGCGCTTTGTATCTATATTAAAATCTGCTAAGGACACTGAAGATAGAATCCTTTCTATGCTTGCTTTAAATAGCTTTCTTCAGTACCCGGATGGATTGGTTGATCTTACTTCCTACACTAAGGATGTCCTAAAAGGTCTGAGAGAGCTAAAGAGATTCTCCCCTCTGGCATCTGAAATGCTTAAAGTTCTTGTTGAAGGGAATGAATCTAAAGCTGGCATCTGGATGCATAAAGAGTTAATTCAGGTAGATTGCAGTGAGAACGGAGAAGTATTGTCTGTCACTTGTCATAAGGATAAAATATTTTCAGGCCATTCAGATGGAACTATCAAGGTCTGGGCAGTAAGGGGGAGCTTATTCCATTTGATACAAGAGACGCAAGAACACATGAAGGCGATTTCAAGTTTGGTAATTTCAGAATCTGGTGACAGACTATACAGTAGTTCACTTGATCGATCTGTAAAGGTCTGGTCTATAGGAAAGTCAGCAATACAGTGTGTACAGGTGCATGATATGAAAGATCAGATTCATAATTTAGCTGTAGCCAATAGCAAATTCTGCTACATTCCTCATGGAAATGGTGTTAAGGTTCAATCATTGAATGGAGAATCGAAGCTGTTAAACAGTAACAAATACGTCAGGTGCTTGGCTCTTGTTCATGAGAGACTATACTGCGGATGCCACGACAACAGTATTCAGGAGATAGATTTGGAAACAGGAACTGTCAATTCCATTCAAAGCGGTTCTAAAAGATTGCTTGGTAGAGCAAATCCCGTTTATGCGATACAAATTCGTGGTGAACATATATATGCAGCCAATTCTTCCTTGGATGGAGCTGTTATAAAGATATGGAACACTTCCAATTACAGTATGATTGGATCACTGGGAATTGCTTCAGAAGTGAGGACGATGGCAATGAGCTCAGAATTAATTTACTTGGGTTGCAGGGGAGGAGCTGTGGAAATTTGGGATAGGAAGAAACAGAACAGAATTGATACATTACAGATTGGTACAAATGGTAAGATTGCTTGCATGGCTGTCGATGGAAATGAAGAAATTTTTGTCATTGGAACCTCTGATGGCCGAATTCAGGCGGTGTCAATGGCTCCTATCGCAGTCGGTGATGTGATTCCAGACGGAGCTTTGTCCTACTTGGATGAGAATAACAAACCTCAAACCGTGTCTATCCACTCCCTCGCCGCCGGCAAGAAGGTCATCATATTCGGTGTTCCCGGTGCCTTCACTCCTACTTGCAGCTTGAAGCATGTGCCTGGCTTCATTGAGAGAGCAGAGGAGCTGAAAGGGAAGGGTGGGGATGAAATCATCTGTATCAGTGTTAATGATCCATATGTAATGAACGCATGGGCCAAAACTTACCCTGAGAACAAGCATGTGAAGTTCCTTGCTGATGGCTCCGCCAAATATAACCTAGCTCTGGGGCTGGAGCTTGACCTTACGGAGAAAGGCCTTGGCACCCGCTCTAGGAGGTATGCCCTTCTGGTTGACGATCTCAAGGTGAAGGTTGCAAATGTTGAGAATGCAGGAGAATTCACAGTCTCCAGTGCTGAAGATATCATCAAAGCTCTTTGA 4488 0.4352 MTTTTATTSSQILRHTTAFLSDVLSHSQLLRRLISTLLRDSSISNQITLKQLNLAANTLNNAISVSSPSIRSSSLTLAEKLLLPLPQNPISSFLLSLIYTINKRQVEAAISILQVFYLTPSLARSEIAPFLYEQLFSLHLLPVFRSFDEQRAKILPSTSANSARYPDDYSIFDESVVLPYTKLLSRMSDDQASKLRELERDYEEAIDDTCRIVAEYFKAVLMNNTSDSSISPPLSVQKNSRDDAEMEHSEEEIVETEMPLFKNGRYNPIWTEREASIEFSSISFSAKYLNAPFYPQRVSPKILKHQESSKKLSLPSRSYIDAETDHESSDENMPCYSSESEAETKDKDTMVPLETRRSQIQESVQIGIAEPGGSPDYTMADYDHQPPGNGKSTPPKDFVCPITGNLFDDPVTLETGQTYERKAIEEWFNRGNSTCPITRQELQNTQLPKTNYVLKRLIASWKEQNPNSIPSPSPSESLHTETEVPIKSTTPSTSPNSVITQANVDGMIGELRHAINNLYMSEILEESEMAVLQIEQSWKELNLAVDIQTMLSKPPIINGFMEILFNSVDPQVLQATVFLLAEMGSRDNAVIQTLTRVDSDVECIMALFKNGLTEAIVLIYLLKPSTTALAEMAILESLVTVFNKKEEDLLKMCIKPKSAAVLILAQILGSNEERIASSVAKTLINGRVIECIFGSFRAGWAEERIAALEILLRCIQEDGTCRHLIAEKVELSPILESFIGANGVERFKTVQFCSDLIKLNRTLNEQILHIIKEEGAFSTMHTFLVYMQTSLQDQCPVVAGLLLQLDLLVEPRKMSIYREEAIDTLISCLRNNDFSATQVVAAETIVSLQGRFNFAGKPLMREVLLKRAGFNRNRRSLDQMDHISNISGELETDPEEEKAADDWERKIASVLVGHEFGLLFEALAEGLKSRSTQLSSACFISATWLTYMLTILPDTGIRGAACVCLLKRFVSILKSAKDTEDRILSMLALNSFLQYPDGLVDLTSYTKDVLKGLRELKRFSPLASEMLKVLVEGNESKAGIWMHKELIQVDCSENGEVLSVTCHKDKIFSGHSDGTIKVWAVRGSLFHLIQETQEHMKAISSLVISESGDRLYSSSLDRSVKVWSIGKSAIQCVQVHDMKDQIHNLAVANSKFCYIPHGNGVKVQSLNGESKLLNSNKYVRCLALVHERLYCGCHDNSIQEIDLETGTVNSIQSGSKRLLGRANPVYAIQIRGEHIYAANSSLDGAVIKIWNTSNYSMIGSLGIASEVRTMAMSSELIYLGCRGGAVEIWDRKKQNRIDTLQIGTNGKIACMAVDGNEEIFVIGTSDGRIQAVSMAPIAVGDVIPDGALSYLDENNKPQTVSIHSLAAGKKVIIFGVPGAFTPTCSLKHVPGFIERAEELKGKGGDEIICISVNDPYVMNAWAKTYPENKHVKFLADGSAKYNLALGLELDLTEKGLGTRSRRYALLVDDLKVKVANVENAGEFTVSSAEDIIKAL 1495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1551 1495 SUPERFAMILY WD40 repeat-like 1061 1335 IPR036322 GO:0005515
Lele08g1551 1495 SUPERFAMILY Thioredoxin-like 1334 1495 IPR036249 -
Lele08g1551 1495 MobiDBLite consensus disorder prediction 464 498 - -
Lele08g1551 1495 Pfam Redoxin 1339 1492 IPR013740 GO:0016491
Lele08g1551 1495 SUPERFAMILY ARM repeat 516 1014 IPR016024 -
Lele08g1551 1495 Gene3D - 1031 1336 IPR015943 GO:0005515
Lele08g1551 1495 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1092 1125 - -
Lele08g1551 1495 MobiDBLite consensus disorder prediction 304 350 - -
Lele08g1551 1495 Pfam WD domain, G-beta repeat 1091 1124 IPR001680 GO:0005515
Lele08g1551 1495 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 3 1334 - -
Lele08g1551 1495 SMART Ubox_2 397 461 IPR003613 GO:0004842|GO:0016567
Lele08g1551 1495 Gene3D Glutaredoxin 1337 1494 - -
Lele08g1551 1495 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 380 471 IPR013083 -
Lele08g1551 1495 SUPERFAMILY RING/U-box 391 471 - -
Lele08g1551 1495 ProSiteProfiles U-box domain profile. 393 468 IPR003613 GO:0004842|GO:0016567
Lele08g1551 1495 ProSiteProfiles Trp-Asp (WD) repeats profile. 1092 1125 IPR001680 GO:0005515
Lele08g1551 1495 CDD RING-Ubox_PUB 398 440 IPR045210 -
Lele08g1551 1495 Pfam U-box domain 395 465 IPR003613 GO:0004842|GO:0016567
Lele08g1551 1495 SMART WD40_4 1043 1080 IPR001680 GO:0005515
Lele08g1551 1495 SMART WD40_4 1215 1251 IPR001680 GO:0005515
Lele08g1551 1495 SMART WD40_4 1159 1202 IPR001680 GO:0005515
Lele08g1551 1495 SMART WD40_4 1085 1124 IPR001680 GO:0005515
Lele08g1551 1495 SMART WD40_4 1254 1290 IPR001680 GO:0005515
Lele08g1551 1495 SMART WD40_4 1293 1333 IPR001680 GO:0005515
Lele08g1551 1495 MobiDBLite consensus disorder prediction 368 392 - -
Lele08g1551 1495 CDD PRX5_like 1339 1493 IPR037944 GO:0008379|GO:0034599
Lele08g1551 1495 ProSiteProfiles Thioredoxin domain profile. 1337 1495 IPR013766 -
Lele08g1551 1495 Coils Coil 188 208 - -
Lele08g1551 1495 FunFam Peroxiredoxin 1335 1495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1551 Lele-ChrLele08 10198876 10209595 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1551 394 474 U-box Gene Family AT1G67530 51.852 3.14e-18 89.0