Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1550 ATGAATAGAGGTCATCTTCTTCATCAGAGCTCACCGGTGCAGCAAATGATGGCCAACCCTAACTGGTGGAATATCGATATTAACACCATGCGTAGTCCTCAACAACAACCTCCTTCAAATCCTTTCTTGTCCTCTCCCTCCAATTTTCTACCCAATCACCAGCTTTCTTCTTCTTGGCAACATGACCTCAATAATCAACAACACCTTCCACAACCTGACTCATGGACCCAACTCCTCATGAGCGGATCGGTGGCTGAAGAAGAAAGAGGAGGTATGGGGCATCAGTTTCAGGCACTGAATAATGCTGCTCTGGTGGATATTAAGCAAGAAAGTTCTTCAGTGAACAGCTATGGTGGTTATGGACACGGAAGCAGTGAAGAATTTCTGGCAGTGAAACCTGCAGGTTGGCCACAAATGGTGGTTCCAGCTTCTTCCCCAAAGTCCTGTGTCACAAGTTTCAGTAGCAATATGTTGGATTTCTCTAATAATCACACTGATGCTAACCCGTCTCTGCCAGATCCATCTTCTGAGTGCAACAGCAGTGCAAGTGGTGGGGTCGCGAAGAAGGCTAGGGTGCAAGCCTCTGGAGCTCAGTCCACCTTCAAGGTCAGGAAGGAGAAGCTCGGTGACAGAATCACAGCCCTTCATCAGCTAGTTTCTCCATTTGGGAAGACTGACACAGCGTCTGTGCTGTTAGAAGCTATTGGGTATATCAGATTCCTTCAGAGTCAGATCGAGGCTCTTAGCTTACCATACTTGGGCAATGCTACATCATCTTCAAACCTCAGGCACCAACAATCTGCAGTTCAAGGAGAGAGTAATTGTATATTCCCTGAAGACCCTGGTCAGCTGCTGCATGAAAACAGCTTGAAGAGGAAAGTGCCTGGTAGTAATCCGCAGGAATCAAGAGAAGAAGGGAAGAAGGACCTGAGAAGTAGAGGGTTGTGTCTGGTTCCTGTGTCGTGCACAATGCAAGTTGGGAGTGATAATGGAGCAGACTATTGGGCTCCTGCACTAGGCGCAGGGTTTCGATAG 1035 0.4763 MNRGHLLHQSSPVQQMMANPNWWNIDINTMRSPQQQPPSNPFLSSPSNFLPNHQLSSSWQHDLNNQQHLPQPDSWTQLLMSGSVAEEERGGMGHQFQALNNAALVDIKQESSSVNSYGGYGHGSSEEFLAVKPAGWPQMVVPASSPKSCVTSFSSNMLDFSNNHTDANPSLPDPSSECNSSASGGVAKKARVQASGAQSTFKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSLPYLGNATSSSNLRHQQSAVQGESNCIFPEDPGQLLHENSLKRKVPGSNPQESREEGKKDLRSRGLCLVPVSCTMQVGSDNGADYWAPALGAGFR 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1550 344 MobiDBLite consensus disorder prediction 286 310 - -
Lele08g1550 344 Gene3D - 199 265 IPR036638 GO:0046983
Lele08g1550 344 MobiDBLite consensus disorder prediction 29 56 - -
Lele08g1550 344 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 202 252 IPR036638 GO:0046983
Lele08g1550 344 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 192 241 IPR011598 GO:0046983
Lele08g1550 344 MobiDBLite consensus disorder prediction 164 183 - -
Lele08g1550 344 MobiDBLite consensus disorder prediction 164 185 - -
Lele08g1550 344 CDD bHLH_AtbHLH_like 200 249 IPR045239 -
Lele08g1550 344 FunFam transcription factor bHLH68 isoform X1 199 252 - -
Lele08g1550 344 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 48 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1550 Lele-ChrLele08 10190708 10194095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1550 1 284 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 41.962 1.79e-53 178