Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1547 ATGGCAAAATTCAATGAAATATTTGTGGCTTTGTTTATATTTGCATCTGCCTTCAACTTATTGGCTCCAATGGTGGGTGCCAAGTTCTCCAAGAGCATGGACATCACCTGGGGCATTCAACACACAGCGTTTCAGGCCAACGGTGAAGATCTTCCGCTCAGGCTTGATCAAACTTCAGCTCATACCTGATGGTATGTTGATGGGCTTCCACTTCGAGTGTTTCGAAACTACGAGAAAGAAGGCATTGCTTATCCAAACAAGCAAGGAATGAAGGTGTATACGAGTCTATGGGATGCAGATGATTGGGCAACTAGAGGTGGGCTTGTTAAGACTAATTGGAATGATGCTCCGTTCACAGCCAAACTTAGCCATTTTAAAGCAAGGGCTTGCAAGTGGAATGGACCAGTCAGCATTACTCAATGTTCTGCCAATAATATCCCTCCAAACTGGTGGACCAATTCCATTTACAGCAGACTGAATATGCCCAGATTGATCTCCATCCTTAGCGTTGCATACTCCTCCAGATCTTTCGAGGAGAGGTCGTCAGCCAAGGAAAAAATGTTGACGGCAATGGAGGCTGGGGGCGAAGGAGGTTGCGGATCAATAGAGGAAGAAGAAACTGGCTGCAAAATATTAACTCCTCATAACCCACCTCTCTCTTTGGTCGGAAGTTTGGTCGGAAGGAGTAAGAGCGGAAGAGAGTCACTGCAGGTAAGGGAGAGGCTGGTCGCTGTGAGGGGCTCAGTCACAGAGTTACAAATATGCCCCTCTGCAATATCCGCAAGTGCCCGTGATGTGAACCAACTCAAACGACAAAATTGCCCTTGCCTGTACGGTCCGTGTCATCGTGCACTTGAGAGTCTATCTGTGGCTTTGGTTTCTCTTCTTCCAAAGACACAGATCCTCTTGCAATCTCCTACGCATATTGATACTTTCGAGATCGTCGCCGTCAAGATCGAGAATACTAAAACAAAGCATCCGCAGTTGCTTTATGAGGCAAAACTGTACAACATTCTTCAAGGAGGAAGTGGCATTCCTAGCATAAGATGGTCTGGTGTTGATGGGGAGGAGAATGTGCTTGTTCTTGATTTGCTGGGACCGAGTCTTGAGGATCTGTTTGTGTATTGTGGAAGAAAGTTTTCATTGAAGACAGTCTTAATGCTGGCTGATCAAATGATCACTAGAATAGAATATGTGCACTCTAAGGGATTTTTGCATAGGGATATAAAACCTGATAACTTTCTCATGGGACTTGGTCGGAAGGCTAGCCAGGTTTACATAATTGATTTTGGTCTTGCGAAAAGGTATCGGGAATCCACAACCAACCGCCACATCCCTTATAGGGAGAACAAAAATTTAACAGGGACTGCACGTTATGCAAGTTGCAATACTCATCTTGGGATTGAACAAAGCCGACGGGATGACTTGGAGTCACTGGGTTATGTTCTTCTGTACTTCCTGAGAGGAAGCCTTCCTTGGCAAGGTCTAAAGGCTGCAACAAAGAAGCAGAAGTATGATAAAATATGTGAAAAGAAATTGTCAACTCCCATTGAGGTCCTCTGCAAATCTCATCCTGTAGAGTTTGCTTCATACTTTCACTACTGCCACTCTCTGACTTTTGACCAGCGGCCTGATTATGGATTCTTGAAGCGTGTATTTCGGGAACTATTTACTCGAGAAGGTTATGAATTTGACTACGTATTTGATTGGACCATCTTGAAGTATCAGCAGGCACAAAAGAACAAATCTCAGCCACGCATACCTCCGATTACTGGAGCAAGCAACAGTCGTGCCATGCCAATGGATGTTGACAACCATCATGGTGATGTATCAGATCGTATTAGATCAGGCAATGCTACTAGTTCTGGTGTTAAATTGCAGTTTAAATCACCAATGGGCAAAATTTTAAGTTCTGAACATCCTTTTAAGAAGAATCTGCTAATTCTGGACATGAACATGGTAAAATTGGCCCTTCTAGCAGCTGGATTTCATCTCTGCATCGTGCCAAATGAAATACCAATATGCTGTGAATCTGTTCAAGAAAATTCTCGTGCAAATGTGAAGCTGCAAACGTTTGGTGGTTCACTTGCAACTTTTCCTGTGTATTTAATCAAGAATATCCCAGTGATTTATTTATGGAGACTGTCAAATTTGCTGCCATCTTGTGCTACTTCTTTCCCAAGCAAATTGTGCAAGAGAAAAGAACGACAGATTGGCTTCATGCTCTATCATTTGGCTGTGGATCTAGTTAGGCTTGTAACAAATTTTGAAAGAGATGCTTTCTATGTGTGTTTGATGCTAGAGCCAATAGGCCTTTTGAAGAATGGATCTTTTGATTGTTATTCAACATTTCTGTTAGAAGGCTGCCTTTTCATGGACAATCTATGCTCTTTCTTGGTTTATGGTGCTGGTTCTGGCTCAGGCTCAAGGGAAAACAATTCTAATGAGAGAGTACATTTGAAGGCTGGTAACTTCGGTATCCTGTGCTGGATCTATGCTGTTTTTGTATAG 2511 0.4309 MAKFNEIFVALFIFASAFNLLAPMVGAKFSKSMDITWGIQHTAFQANGEDLPLRLDQTSAHTXWYVDGLPLRVFRNYEKEGIAYPNKQGMKVYTSLWDADDWATRGGLVKTNWNDAPFTAKLSHFKARACKWNGPVSITQCSANNIPPNWWTNSIYSRLNMPRLISILSVAYSSRSFEERSSAKEKMLTAMEAGGEGGCGSIEEEETGCKILTPHNPPLSLVGSLVGRSKSGRESLQVRERLVAVRGSVTELQICPSAISASARDVNQLKRQNCPCLYGPCHRALESLSVALVSLLPKTQILLQSPTHIDTFEIVAVKIENTKTKHPQLLYEAKLYNILQGGSGIPSIRWSGVDGEENVLVLDLLGPSLEDLFVYCGRKFSLKTVLMLADQMITRIEYVHSKGFLHRDIKPDNFLMGLGRKASQVYIIDFGLAKRYRESTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKLSTPIEVLCKSHPVEFASYFHYCHSLTFDQRPDYGFLKRVFRELFTREGYEFDYVFDWTILKYQQAQKNKSQPRIPPITGASNSRAMPMDVDNHHGDVSDRIRSGNATSSGVKLQFKSPMGKILSSEHPFKKNLLILDMNMVKLALLAAGFHLCIVPNEIPICCESVQENSRANVKLQTFGGSLATFPVYLIKNIPVIYLWRLSNLLPSCATSFPSKLCKRKERQIGFMLYHLAVDLVRLVTNFERDAFYVCLMLEPIGLLKNGSFDCYSTFLLEGCLFMDNLCSFLVYGAGSGSGSRENNSNERVHLKAGNFGILCWIYAVFV 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1547 836 ProSiteProfiles Protein kinase domain profile. 188 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g1547 836 MobiDBLite consensus disorder prediction 584 614 - -
Lele08g1547 836 SUPERFAMILY Concanavalin A-like lectins/glucanases 55 160 IPR013320 -
Lele08g1547 836 Gene3D Transferase(Phosphotransferase) domain 1 301 607 - -
Lele08g1547 836 SUPERFAMILY Protein kinase-like (PK-like) 308 570 IPR011009 -
Lele08g1547 836 Gene3D - 55 171 - -
Lele08g1547 836 ProSitePatterns Serine/Threonine protein kinases active-site signature. 404 416 IPR008271 GO:0004672|GO:0006468
Lele08g1547 836 Pfam Glycosyl hydrolases family 16 59 114 IPR000757 GO:0004553|GO:0005975
Lele08g1547 836 PANTHER CASEIN KINASE-RELATED 310 591 - -
Lele08g1547 836 Pfam Protein kinase domain 308 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g1547 836 FunFam CK1 family protein kinase 303 601 - -
Lele08g1547 836 SMART serkin_6 301 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1547 Lele-ChrLele08 10128476 10139820 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1547 64 170 Glycoside Hydrolase AT4G28850 59.813 5.40e-39 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Lele08g1547 Pkinase 2e-19 CL0016