Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1544 ATGCGGATTGATCATCGCCCAGCGGTCACCCACAAAAGCTGCGAGTCTGACCTTACCACACATGCACTGATACGTCTCAACTCTGAGATCAGTGGTCTCTCCTCATTTTCAAAACTCCAGCCTAATCCGCACAAACCCACCAAGCCACTGTGTTCACATCCTTCCAAAACCTTTCATTTCCAATTACACTTCACACACGCCACAGAGAAGCTGTTGAGCTGTCTCCGGCCTCATGAATTTTTGGGCAATTTTAGCATCAGACTTTTCTTCAAGTACTTTCTTTCAGTGATGGGTTGTGTTTATTCAAGGGTTTGCATAGGTGAGGTTTGTAGTCCAAGAAATTCCAGGATAAATGAAGGTCGAAATGCGAAAACTAGTGAGGCTGCCTGGTTGTCTCCTGCGTCCTCGGATGTTCAGGAAGGTGAAGTTAGAGACCAATTTAACCAATTGAGCTTAACCAGAGACTCTGAAGTAGGCATCAGAAGGTTATCTAGGGTTTCAGCGCAGTTTCTCCCTCCCGATGGCTCGCGAGCAGTGACGATCCCTTCGGGGAACTTTGAATTGCGTTATTCGTACTTGTCACAGAGAGGTTATTACCCTGATGCTCTGGATAAGGCCAACCAAGACAGTTTTTGCATTCACACCCCGTTTGGTACAAACCCTGATGATAATTTCTTTGGGGTTTTCGATGGGCACGGAGAGTTTGGGACTCAGTGTTCGCAGTTCGTGAAGCGAAAACTATGTGAGAATTTGCTTAGAAATAGTAAATTCCGGGTAGATGCTGTGGAGGCCTGTCACGCTGCGTTTTTAGCGACAAACTCGCAGTTGCATGCTGATGTTTTTGATGATAGCATGAGTGGTACTACAGCAATTACGGTTTTGGTTCGGGGTAGGACTTTATACGTAGCCAATTCAGGTGATTCTAGGGCAGTGATTGCAGAAAGGAGAGGAAACGATATTGTGGCAGTAGACTTATCCATGGATCAAACACCTTTTAGGTCAGACGAGCTTGAACGGGTCAAGCTCTGTGGAGCTAGAGTTCTTACTCTGGATCAGATTGAAGGGCTCAAGAATCCTGATGTTCAATGTTGGGACACAGAAGAAGCAGATGATGGTGACCCGCCTAGATTGTGGGTGCCGAACGGGATGTACCCTGGCACAGCTTTCACTAGAAGTATCGGTGATTCAATTGCCGAGACCATTGGTGTCGTTGCTACCCCTGAAATTGTTGTTTTCGAGCTCACAGCAAACCATCCTTTCTTTGTGCTTGCCAGCGACGGTGTCTTTGAGTTTCTATCTAGTCAGACTGTGGTTGAAATGGTTGCTAAATTCAAAGATCCTCGTGATGCTTGTGCTGCAATTGTGGCTGAATCTTATCGACTTTGGCTACAGTATGAAACTCGTACAGATGATATTACCATTATTGTTGTTCATGTTAATGGACTAACCAATCCTGCTGCTGGTCAATCTGCCAGTTATGGTGATGTTAGAACCCCAGTTCCTCAAGTTGTTGAGGTGACAGGATCAGAATCACCTTCCACCCTAAGCTGGAACTCCAAGAACCCTAGGGCAAGGCATGATTTATCAAGGGCACGTATCCGAGCAATTGAAAATTCCTTAGAAAATGGGCAAACTTGGGTTCCTCCATCTTCAGCTCATAGGAAAACATGGGAGGAAGAAGCACACATTGAGCGGGCACTGCATGATCATTTTCTCTTCAGAAAACTTACTGATTCTCAGTGTCACGTTTTATTGGATTGCATGCAAAGAGTTGAAGTTCAACCTGGAGATGTTATAGTCAAACAGGGTGGTGAAGGTGACTGTTTCTATGTTGTTGGTAGTGGAGAATTTGAGGTCTTGGCAACACAGGAGGAACAAAACGGGGAAGTGCCTAGGGTTTTGCAGCACTACACAGCAGAAAAATTGTCTTGTTTTGGAGAACTTGCTCTAATGTATAATAAACCACTTCAGGCCTCTGTACGTGCTGTAAGAGAAGGAACACTGTGGGCCTTAAGGCGAGAAGACTTTCGAGGAATTTTAATGTCAAAATTCTCTAACTTATCATCATTGAAGTTGCTTCGGTCAGTAGATCTCCTTTCAAAATTGACAATCTTACAACTCAGTCAGATCTCGGAGTCCCTTTCTGAAGTTTCCTTCTCAGATGGCCAAACAATAATTGATCAAAATGAAGCCGCTGCGTTGTACATAATCCAGAAGGGACAAGTGAGAATAACTTTTGATTCAGAATTACTGAAAAACCCAAATGCTTGCAGCCTGAAGTCTGACAATCAAAATGAGAATGATGAACTACAGAGCACGAAGGAGCTATCGATAGAGAAGCCTGAGGGAAGTTATTTTGGTGAATGGACTCTTCTTGGTGAAAATATTGGAACCTTTAGGGCTGTTGCTGTGGGTGATGTGTTATGTACTGTACTAACAAAGGAAAAATTTGAATCAGAAATTGGCCCCTTGAAAAAGTTTTCTCTGGAAGATCAGAAGTCAAAGGACAATTCCTCAGACTATTTGAAGGAATCAACTAAAAGTCTTAATTTTTCTTCAATTGATAAAATCCATCTCTCAGATTTGGACTGGAAAAAGAGTGTATATTCTACTGACTGTTCTGAGGTTGGGCTTACTCTATTAGGAGACTCAGAGAATGTGCTTACTTTGAAGAGATTCTCTAAGCAAAAGGTGAAAAGGCTGGGAAAGGAAGCACAAGTTTTAAACGAGAAAAATTTGATCAAGGGCATGAGCTCTTCGGCTTGTATACCACAGGTTCTGTGCACCTGTGCTGATCGAGTATATGCTGGGATAGTACTAAATACACGGATCGCGTGTCTATTGTCTTCCATACTCACAAGTCCTTTTGGCGAATCATCAGCAAGATTTTGTGCTGCTTGTGTTGTCACTGCCTTAGAAGATTTACATAAGAATGGTGTTCTTTACAGAGGGGTATCACCTGATCTTCTGACTTTGGACCAAACTGGATGTATACAGCTAGTGGACTTCAGGTTTGGGAAGAAGCTCTCAGATGAAAGAACATTCACAATTTGTGGAATGGCAGACTCATTAGCTCCGGAGATTGTTCTGGGAAAAGGCCATGGTTTCCCTGCTGACTGGTGGGCATTGGGAGTTCTGATTTATTTTATGTTACGGGGTGAGATGCCTTTTGGATCGTGGAGAGAAAATGAGCTTGATACGGTGGCCAAAATTGCAAAACGGAAGCTAAACCTTCCAGAAACTTTCAGCCCAGAGGCTGCTGATCTCATCACTAAGTTACTTGATGGTGACGAAAGCACTAGACTTGGTAGCCAAGGTCCCGATTCTGTGAAAAGCCATCCTTGGTTTAATGGTGTTGACTGGGAAGGGATAAGAAACCATAACTTTCCTGCTCCTCCAGAAATTCTCTCTCGTATAACTCAGTACTTGGAAATTCATTCTGAGGATTGCACTGTTGCCCAAGTTTCCCCGTCAGAGGAGGTAGATGAACTCGACATTCCTGAATGGCTTGAGGACTGGTAG 3522 0.4373 MRIDHRPAVTHKSCESDLTTHALIRLNSEISGLSSFSKLQPNPHKPTKPLCSHPSKTFHFQLHFTHATEKLLSCLRPHEFLGNFSIRLFFKYFLSVMGCVYSRVCIGEVCSPRNSRINEGRNAKTSEAAWLSPASSDVQEGEVRDQFNQLSLTRDSEVGIRRLSRVSAQFLPPDGSRAVTIPSGNFELRYSYLSQRGYYPDALDKANQDSFCIHTPFGTNPDDNFFGVFDGHGEFGTQCSQFVKRKLCENLLRNSKFRVDAVEACHAAFLATNSQLHADVFDDSMSGTTAITVLVRGRTLYVANSGDSRAVIAERRGNDIVAVDLSMDQTPFRSDELERVKLCGARVLTLDQIEGLKNPDVQCWDTEEADDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVATPEIVVFELTANHPFFVLASDGVFEFLSSQTVVEMVAKFKDPRDACAAIVAESYRLWLQYETRTDDITIIVVHVNGLTNPAAGQSASYGDVRTPVPQVVEVTGSESPSTLSWNSKNPRARHDLSRARIRAIENSLENGQTWVPPSSAHRKTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQPGDVIVKQGGEGDCFYVVGSGEFEVLATQEEQNGEVPRVLQHYTAEKLSCFGELALMYNKPLQASVRAVREGTLWALRREDFRGILMSKFSNLSSLKLLRSVDLLSKLTILQLSQISESLSEVSFSDGQTIIDQNEAAALYIIQKGQVRITFDSELLKNPNACSLKSDNQNENDELQSTKELSIEKPEGSYFGEWTLLGENIGTFRAVAVGDVLCTVLTKEKFESEIGPLKKFSLEDQKSKDNSSDYLKESTKSLNFSSIDKIHLSDLDWKKSVYSTDCSEVGLTLLGDSENVLTLKRFSKQKVKRLGKEAQVLNEKNLIKGMSSSACIPQVLCTCADRVYAGIVLNTRIACLLSSILTSPFGESSARFCAACVVTALEDLHKNGVLYRGVSPDLLTLDQTGCIQLVDFRFGKKLSDERTFTICGMADSLAPEIVLGKGHGFPADWWALGVLIYFMLRGEMPFGSWRENELDTVAKIAKRKLNLPETFSPEAADLITKLLDGDESTRLGSQGPDSVKSHPWFNGVDWEGIRNHNFPAPPEILSRITQYLEIHSEDCTVAQVSPSEEVDELDIPEWLEDW 1173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1544 1173 CDD CAP_ED 572 681 IPR000595 -
Lele08g1544 1173 FunFam Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 546 686 - -
Lele08g1544 1173 Pfam Protein phosphatase 2C 216 458 IPR001932 -
Lele08g1544 1173 ProSiteProfiles cAMP/cGMP binding motif profile. 572 681 IPR000595 -
Lele08g1544 1173 Gene3D Jelly Rolls 687 840 IPR014710 -
Lele08g1544 1173 SUPERFAMILY cAMP-binding domain-like 553 682 IPR018490 -
Lele08g1544 1173 Gene3D Transferase(Phosphotransferase) domain 1 947 1132 - -
Lele08g1544 1173 SMART PP2C_4 179 477 IPR001932 -
Lele08g1544 1173 SUPERFAMILY PP2C-like 177 481 IPR036457 -
Lele08g1544 1173 SMART cnmp_10 698 836 IPR000595 -
Lele08g1544 1173 SMART cnmp_10 572 695 IPR000595 -
Lele08g1544 1173 ProSiteProfiles PPM-type phosphatase domain profile. 189 479 IPR001932 -
Lele08g1544 1173 Pfam Cyclic nucleotide-binding domain 591 682 IPR000595 -
Lele08g1544 1173 Pfam Cyclic nucleotide-binding domain 717 819 IPR000595 -
Lele08g1544 1173 Gene3D Phosphorylase Kinase; domain 1 868 946 - -
Lele08g1544 1173 Gene3D Jelly Rolls 544 686 IPR014710 -
Lele08g1544 1173 ProSiteProfiles cAMP/cGMP binding motif profile. 698 823 IPR000595 -
Lele08g1544 1173 FunFam Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 184 481 - -
Lele08g1544 1173 CDD CAP_ED 698 818 IPR000595 -
Lele08g1544 1173 PRINTS cAMP-dependent protein kinase signature 593 607 - -
Lele08g1544 1173 PRINTS cAMP-dependent protein kinase signature 608 622 - -
Lele08g1544 1173 PRINTS cAMP-dependent protein kinase signature 643 652 - -
Lele08g1544 1173 SUPERFAMILY Protein kinase-like (PK-like) 853 1150 IPR011009 -
Lele08g1544 1173 ProSiteProfiles Protein kinase domain profile. 843 1116 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g1544 1173 CDD PP2Cc 205 479 IPR001932 -
Lele08g1544 1173 SUPERFAMILY cAMP-binding domain-like 691 823 IPR018490 -
Lele08g1544 1173 Pfam Protein kinase domain 882 1116 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g1544 1173 Gene3D - 183 480 IPR036457 -
Lele08g1544 1173 SMART serkin_6 869 1116 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g1544 1173 ProSitePatterns PPM-type phosphatase domain signature. 225 233 IPR000222 GO:0043169
Lele08g1544 1173 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 553 1135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1544 Lele-ChrLele08 10094783 10103343 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1544 97 1173 PP2C-type Phosphatase Gene Family AT2G20050 67.792 0.0 1496
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PKA-PKG Lele08g1544 Pkinase 4.9e-30 CL0016