Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1535 ATGGCTGAGCTACCCAGCTCAGAGATAGAGACAAGCATTCACACTAACTGGTCTTCACAATCTCCATCGTCGTCGTCTTCATCTTCGTCGTTGTCGTCACCATCTGGGTTATCTCAGTGTTTACAGAACTCTGCTTCTGAGCCATTACCTGCAGAACAGAGGAAGCTGAAACGAGGCCGAGATAGCAGCAACAGCAAACACCCTGTGTACAGAGGAGTTCGAATGCGGGCGTGGGGCAAGTGGGTGTCGGAAATCCGGGAGCCCAGGAAGAAGAATCGGATTTGGCTCGGCACCTTCGCCACGCCGGAGATGGCGGCGCGTGCCCACGACGTGGCCGCGCTGGCTATCAAAGGCAACTCTGCCATTCTCAACTTCCCCGAACTCGCGGGTTCTCTGCCCCGACCCGCTTCCAACTCACCCAGAGACGTTCAGTCCGCCGCAGCTAAGGCCGCCGCCATGGAAGTATTCAGTCCTCCAACGTCGTCGCTCTCGTCTTCCTGTTCATCGTCCTCATTGGCAATGTCCACCTCCTCCGGCGACCCGTCCACCCCGGAGGAAGAACTCGGCGAGATAGTGGAGCTACCGCCTTTGGGAAGCAGCTTCGAGTCGCCCGACCCGGGTAACGAATTCGTGCTCTATGACCCGGTGGATGGGTGGCTCTACCCTCACCCGTGGTATCACAGCATTTATGATGAAAAGGATTGTAGTGGTTATTTCCTTGGGGAAGACACATTAATGCAAGAAGCAGAGAGTGGATTCCCTAAAGTGGAGAGGGGTAGTTCTCTGAATGTCCCAAAGTGGAACGAGCTTTGA 813 0.5547 MAELPSSEIETSIHTNWSSQSPSSSSSSSSLSSPSGLSQCLQNSASEPLPAEQRKLKRGRDSSNSKHPVYRGVRMRAWGKWVSEIREPRKKNRIWLGTFATPEMAARAHDVAALAIKGNSAILNFPELAGSLPRPASNSPRDVQSAAAKAAAMEVFSPPTSSLSSSCSSSSLAMSTSSGDPSTPEEELGEIVELPPLGSSFESPDPGNEFVLYDPVDGWLYPHPWYHSIYDEKDCSGYFLGEDTLMQEAESGFPKVERGSSLNVPKWNEL 270
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1535 270 SUPERFAMILY DNA-binding domain 69 127 IPR016177 GO:0003677
Lele08g1535 270 PRINTS Ethylene responsive element binding protein signature 70 81 IPR001471 GO:0003700|GO:0006355
Lele08g1535 270 PRINTS Ethylene responsive element binding protein signature 92 108 IPR001471 GO:0003700|GO:0006355
Lele08g1535 270 CDD AP2 70 128 IPR001471 GO:0003700|GO:0006355
Lele08g1535 270 MobiDBLite consensus disorder prediction 51 67 - -
Lele08g1535 270 FunFam Ethylene-responsive transcription factor 2 68 127 - -
Lele08g1535 270 MobiDBLite consensus disorder prediction 8 49 - -
Lele08g1535 270 MobiDBLite consensus disorder prediction 162 187 - -
Lele08g1535 270 ProSiteProfiles AP2/ERF domain profile. 69 126 IPR001471 GO:0003700|GO:0006355
Lele08g1535 270 Pfam AP2 domain 68 118 IPR001471 GO:0003700|GO:0006355
Lele08g1535 270 SMART rav1_2 69 132 IPR001471 GO:0003700|GO:0006355
Lele08g1535 270 MobiDBLite consensus disorder prediction 162 183 - -
Lele08g1535 270 Gene3D AP2/ERF domain 69 127 IPR036955 GO:0003700|GO:0006355
Lele08g1535 270 MobiDBLite consensus disorder prediction 1 68 - -
Lele08g1535 270 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 30 199 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele08g1535 Lele-ChrLele08 10050402 10051651 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1535 43 231 AP2-EREBP Transcription Factor Family AT5G11590 66.497 4.93e-68 209
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele08g1535 AP2 5.3e-14 CL0081