Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1523 ATGGAACAACCCTTGCACTTGGACTTGGACGACTTCCAACTCGAACGAGTCGGCTCCGACTCCCCGTTCTCCACCTCCTCTTCCTCTTCCTCTTCCACCTTAACCTTCGTACTCGCCGCCGAATATTCCCGCAGCACCTCCAGCTCCGGCGACATTTCCACCATCAGCTCTGGCTCCGGCGACATTCCGGGGGCCGCGATCTCCGAGGCCCTGCCCTCGCCTCCCTCGCTCGATCCCCCTCCGTCCCAAGAGATGACCGCCACCAGGGACAAGTGCGTCGGAAGGACTAACAAGGGAGTCAGTTGGGGATTTACGTCGGTGATTGGGAGGAGGAAAGAGATGGAGGACGCTATTGCTGTTATCCCAGGGTTTATGTCCCTCCCGTGCGATCGCGTCGGCGGATGTATGGCTCCTTGCTCGAAATCCTCCGGCGAGATCTCGCCCGTTCATTTCTTCGGCGTTTACGACGGCCACGGTGGATCTCAGGTGGCCAAGTTTTGTGCCAAACGGATGCATGAAGCTATAGCGGAAGAGTGGGATCGAGACATAGCTCAGGGAACTGAATGGAAGGGAAGGTGGGAGGCCGTTTTTGCTAGTGGCTTTGAGAAGACTGACAATGAAATCTTAACAGATGCGGTCGCACCAGAAATGGTAGGATCTACGGCTGCTGTGGTGGTTCTATCTCGTTGCCAAATCATTACATCTAACTGTGGCGACTCAAGGGCAGTTCTTTGCCGCGGCACACAAACAATCCCCTTGACTGTGGATCAGAAGCCTGATAGACAAGATGAACTATTGAGAATTGAAGGAGGAGGAGGAAAAGTCATAAACTGGAACGGAGCTAGAGTGTTTGGAGTTCTTGCCATGTCCAGGGCCATAGGTGATCGGTATTTGAGGCCATGGATTATTCCAGTGCCTGAGACCACTTTTACAACGAGAAGCGAGGAGGACGAATGCCTAATATTGGCAAGTGACGGGCTTTGGGATGTAATGACGAATGCAGAGGTTGGGGAAGTTGCACGCCATATTCTGAGACGACGTAGAAGGTCCTTGTCCATGGAAGAAACTCCACCTGCCCAAGTGGTGGCTGATAGCCTCACAGAGATTGCATGTGGTAGAAATAGTAAAGACAATATTTCGATCATAGTTATTGATCTGAAATCAAAGAGAAGACGTCAGCAAAGGCATCCTTTGACTTCCTAA 1203 0.522 MEQPLHLDLDDFQLERVGSDSPFSTSSSSSSSTLTFVLAAEYSRSTSSSGDISTISSGSGDIPGAAISEALPSPPSLDPPPSQEMTATRDKCVGRTNKGVSWGFTSVIGRRKEMEDAIAVIPGFMSLPCDRVGGCMAPCSKSSGEISPVHFFGVYDGHGGSQVAKFCAKRMHEAIAEEWDRDIAQGTEWKGRWEAVFASGFEKTDNEILTDAVAPEMVGSTAAVVVLSRCQIITSNCGDSRAVLCRGTQTIPLTVDQKPDRQDELLRIEGGGGKVINWNGARVFGVLAMSRAIGDRYLRPWIIPVPETTFTTRSEEDECLILASDGLWDVMTNAEVGEVARHILRRRRRSLSMEETPPAQVVADSLTEIACGRNSKDNISIIVIDLKSKRRRQQRHPLTS 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1523 400 CDD PP2Cc 103 386 IPR001932 -
Lele08g1523 400 ProSitePatterns PPM-type phosphatase domain signature. 151 159 IPR000222 GO:0043169
Lele08g1523 400 Gene3D - 88 396 IPR036457 -
Lele08g1523 400 MobiDBLite consensus disorder prediction 1 87 - -
Lele08g1523 400 FunFam Protein phosphatase 2C 51 94 394 - -
Lele08g1523 400 ProSiteProfiles PPM-type phosphatase domain profile. 101 386 IPR001932 -
Lele08g1523 400 MobiDBLite consensus disorder prediction 1 15 - -
Lele08g1523 400 Pfam Protein phosphatase 2C 104 379 IPR001932 -
Lele08g1523 400 SMART PP2C_4 91 384 IPR001932 -
Lele08g1523 400 PANTHER PROTEIN PHOSPHATASE 76 386 - -
Lele08g1523 400 MobiDBLite consensus disorder prediction 18 61 - -
Lele08g1523 400 SMART PP2C_SIG_2 130 386 IPR001932 -
Lele08g1523 400 SUPERFAMILY PP2C-like 93 387 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1523 Lele-ChrLele08 9937369 9942398 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1523 102 399 PP2C-type Phosphatase Gene Family AT4G26080 50.000 7.85e-99 299