Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1521 ATGGCTTCCATTAAGAAGCGTCTTGAAGAATGGACTGAAAGGTTGAAAGAAAGTGGAGCAGATATTGCTTCTCTTTCAGCATGCTTGAAGAAGCCCTTACGCCCTCTGTGGATTTCACAGAGAACTCTCATTTGGATAAATGAAGTGCCCGACCATGATTCTTGGGATTTTACACCCATCACACTAGTGTTTGCATCTTCCTCAACTGGCATAATTCAGCATAGGACTACCTCTGAGTTTAGCTGGAGTTATATACCAGGTGCTGGAGATGATGAAGAAAGTTGGGCAAGGGGTTTATCTCCTAATCCTTTTCATCATGTCTATGATATTATAAACTCTGGTCCTGATGTGTGTAATCAGAAAGTTGCAGATATAGTTGAAAAGAGTAGAGTATATCGCTCTTACAGAGTAGAGAATGCCCCACAGATCACAGTTAAGTCTCTTAAACCATCTTCTCTATCGCATGATGAATTGTCTGTATCTTCTGATGTTTCAAACATGAATTTTGACATATCAAGGTCTTTAGATGATGATTCTACAATGTCTTGGCTAGGTTCAATGAATCTTTCTGTTGGAACTTCTCAATGTGGTATGAACACCGCAGAAGTGCCTGATGTTGATTGCATATTGAGTTGTGATCATGAGTCCATCTCTGTTCCTCTTCGCAGTGAAGAAGCATATCTGCATCTTCCCATAGTTGAGAAGAAGAAGTTGAAAGAAGCTAGAAACACGGGTTCCTCAGAGAAGGAAGTGTTAGAGAAGAAAGATAAGAGTGGAAAAGAGAGATCTATAGCCATAATTTTCAGATATAGTGATTGGATTGATGTGGTTCTCATGGTAATGGGAGAAGGGTATTGCTGGAGCAAAACAGGCGAGAGGCAATTACTGAGAATTCGGTACAAGTATTTAGAAGCTGTGCTGAGACAAGAAGTGGGTTTATTCGATTCCCAAGAAGCAACCACCTCAGAGATCATCAATACCATATCAAAGGACACTTCTCTCATCCAAGAGGTTCTCAGTGAAAAGGTACCACTATTCTTTATGCACTCATCATCATTCATCTCAGGAGTTGCATTTTCTGCATACTTCTGTTGGAGGGTGACCATAGCAGCGTTCCCAACCCTGCTTTTGCTGATTATTCCTGGAATGCTTTATGGCAAGTTCCTTATCTATCTCTCAAACAAGTCCTATAAGGAATATGGGAAAGCAAACGCCATTGTAGAACAGGCTCTAAGCTCCATTAAAACCATATATTCCTTCACTGCTGAGAAGAGAATCATCCACAAGTGTTCAGCTATATTGGACACAACTTCAGAGCTAGGAATCAAGCTAGGCATAGCCAAGGGCCTTTCTGTAGGAAGCATGGGTCTGTCTTTTGCAATATGGGCTTTTCTTTCTTGGCATGGAAAAGTCTACGCAGCTAGCATCACCTTCATTATGAGTGGCCTCTTCCTCAAGGTTATGAGACCAAGGCGTGACAAGTTATTGCAGGCTGGAGATGGAACTAGTGGGTGTAAGTTGGAGAAGATGAGTGGGAAGATAGAGATGAAAAACGTTGATTTCGCATATCCAAGCAGGAAGGAGACTCCAATTCTGCTACAGTTTTGCTTGGAGGTGAAAGCAGGAACGGCAAAATGTACAGAAAATGAAGTGGTCGAGGCTGCCAGGGCAGCAAATGTTCACGAGTTCATCTCACAGCAAGGTTATAGAGCGAGGAACCTATGCCCGCTAAGGCACTTGAAAGGAGCCTTCTTCAACCTTTCTACCCATCAAACTTAG 1779 0.4216 MASIKKRLEEWTERLKESGADIASLSACLKKPLRPLWISQRTLIWINEVPDHDSWDFTPITLVFASSSTGIIQHRTTSEFSWSYIPGAGDDEESWARGLSPNPFHHVYDIINSGPDVCNQKVADIVEKSRVYRSYRVENAPQITVKSLKPSSLSHDELSVSSDVSNMNFDISRSLDDDSTMSWLGSMNLSVGTSQCGMNTAEVPDVDCILSCDHESISVPLRSEEAYLHLPIVEKKKLKEARNTGSSEKEVLEKKDKSGKERSIAIIFRYSDWIDVVLMVMGEGYCWSKTGERQLLRIRYKYLEAVLRQEVGLFDSQEATTSEIINTISKDTSLIQEVLSEKVPLFFMHSSSFISGVAFSAYFCWRVTIAAFPTLLLLIIPGMLYGKFLIYLSNKSYKEYGKANAIVEQALSSIKTIYSFTAEKRIIHKCSAILDTTSELGIKLGIAKGLSVGSMGLSFAIWAFLSWHGKVYAASITFIMSGLFLKVMRPRRDKLLQAGDGTSGCKLEKMSGKIEMKNVDFAYPSRKETPILLQFCLEVKAGTAKCTENEVVEAARAANVHEFISQQGYRARNLCPLRHLKGAFFNLSTHQT 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1521 592 SUPERFAMILY ABC transporter transmembrane region 278 465 IPR036640 GO:0005524|GO:0016020
Lele08g1521 592 Gene3D ABC transporter type 1, transmembrane domain 274 488 IPR036640 GO:0005524|GO:0016020
Lele08g1521 592 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 277 465 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele08g1521 592 PANTHER ABC TRANSPORTER B FAMILY 499 543 - -
Lele08g1521 592 Coils Coil 1 21 - -
Lele08g1521 592 CDD ABC_6TM_Pgp_ABCB1_D1_like 285 482 - -
Lele08g1521 592 Pfam ABC transporter transmembrane region 277 469 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele08g1521 592 Gene3D - 504 543 IPR027417 -
Lele08g1521 592 Pfam Rit1 N-terminal domain 2 127 IPR033449 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1521 Lele-ChrLele08 9924232 9934618 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1521 286 542 Calmodulin-binding Proteins AT2G36910 32.414 3.42e-38 149