Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1514 ATGGAGTTGCGCTTTGACAGAGGAGAACAGAGGAAGTTGATTTGTGGAGATCTTTTCACGAGGACCCTGTACTCTATCTGTTCTGCTGAGCAAATGGGAAGAGCCACCCGGTGGTTGAAGAGCTTGTTTGGGATAAAGAAAGACAGAAACCATGTTTCAGAGGGAGAGCTTAGAGATTTATGTCACAATCCAACCACTATACCACCAAACATCTCGCCTGCAGAAGCTGCTTGGCTTCAATCCTTCTACACAGAAACAGAGAAGCAGCAGAGTAAGCACGCCATTGCGGTGGCCGCAGCCACCGCAGCCGCCGCTGATGCCGCCGTAGCAGCCGCTCAGGCTGCCGTGGCCGTGGTCAGGCTCACCAGCAATGGCAGAGGCACCATGTTCGGCGGCGGTGGACACGAGAGATGGGCTGCCGTTAAGATTCAAACAGTATTCAGGGGTTACTTGGCAAGAAAGGCACTGAGAGCTTTGAAAGGATTGGTGAAATTACAAGCACTTGTGAAAGGCTATTTAGTGAGGAAGCAAGCGACGGCAACATTGCATAGTATGCAAGCTCTTATTAGAGCCCAAGCCACTGTCAGGTCTCAGAAAGCTCGCAGGCTCATGAACAGAGACAATGAAGCACATAGATTTGAAGCTCGAGCACGAAGATCCATGGAGAGATTTGACGACACTAGGAGTGAGTACACAGCACCGATTCACAGCAGAAGGATGTCTTCTTCTTTTGATGCAACAATAAATAACTCTAACAGCATCGACGGAAGCCCCAAAATATTGGAAGTGGACACTGGTAGGCCAAGATCGAGGTCTCGGAGGACCAACACTTCATCAATTTCAGATTTTGACAATGATCCGCAATTCCTTGCACTTTCCTCTCCTCTTCCAGTCCCTTGTTGTCCTACCCCAGCTCGGCTATCGATACCGGACTGTCGCCGGAATCTGCAGGACTCCGACTGGGGGTGGACGGCGGAAGAATGCAGGTCGTGTACGGCACAGAGCACTCCTCGGTTAACCAATTCTTGTGTCTCGTTTAGTTGTAATTCGACGGCTTGCAGGAGCGTTTGCGCCGGCGATGGATTTTACCGGCAATACGGGATTTACCCGAATTACATGGCGAATACTCAGTCATTCAGGGCGAAATTGAGATCTCACAGTGCTCCAAAGCAGAGGCCAGAACCGAAGAGGAGGGTATCGTTGAACGAATTGATGGAGTGTAGGAGTAGTTTGAGCGGGGTTCGAATGCAGAGATCTTGCTCGCAGGTTCAGGAAGCCATTAGCTTCAAGAATGCAGTGATGGGTAAGCTCGAAAAGTCTGCAGAATTTGGCAGGGAAAGAGATAGCAATTACTGGCAGAGGAGGTGGGGGTGA 1374 0.5029 MELRFDRGEQRKLICGDLFTRTLYSICSAEQMGRATRWLKSLFGIKKDRNHVSEGELRDLCHNPTTIPPNISPAEAAWLQSFYTETEKQQSKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSNGRGTMFGGGGHERWAAVKIQTVFRGYLARKALRALKGLVKLQALVKGYLVRKQATATLHSMQALIRAQATVRSQKARRLMNRDNEAHRFEARARRSMERFDDTRSEYTAPIHSRRMSSSFDATINNSNSIDGSPKILEVDTGRPRSRSRRTNTSSISDFDNDPQFLALSSPLPVPCCPTPARLSIPDCRRNLQDSDWGWTAEECRSCTAQSTPRLTNSCVSFSCNSTACRSVCAGDGFYRQYGIYPNYMANTQSFRAKLRSHSAPKQRPEPKRRVSLNELMECRSSLSGVRMQRSCSQVQEAISFKNAVMGKLEKSAEFGRERDSNYWQRRWG 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1514 457 SMART iq_5 158 179 IPR000048 GO:0005515
Lele08g1514 457 SMART iq_5 135 157 IPR000048 GO:0005515
Lele08g1514 457 MobiDBLite consensus disorder prediction 248 286 - -
Lele08g1514 457 PANTHER IQ-DOMAIN 5-RELATED 32 403 - -
Lele08g1514 457 Pfam IQ calmodulin-binding motif 137 157 IPR000048 GO:0005515
Lele08g1514 457 Pfam IQ calmodulin-binding motif 163 177 IPR000048 GO:0005515
Lele08g1514 457 ProSiteProfiles IQ motif profile. 136 164 IPR000048 GO:0005515
Lele08g1514 457 ProSiteProfiles IQ motif profile. 184 212 IPR000048 GO:0005515
Lele08g1514 457 Gene3D - 85 162 - -
Lele08g1514 457 ProSiteProfiles IQ motif profile. 160 187 IPR000048 GO:0005515
Lele08g1514 457 Pfam Protein of unknown function (DUF4005) 333 413 IPR025064 -
Lele08g1514 457 MobiDBLite consensus disorder prediction 272 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1514 Lele-ChrLele08 9858387 9860670 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1514 32 416 IQD Protein Family AT3G16490 49.746 1.01e-92 284