Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1504 ATGGTGAAGGCCTTGTTGATTCTGGCTTTTGATCTCCTCCTCCTCCTCCATCTTAACCTCCATTTGGATGCGGCAAGATCGGCCTTTGGCGTTGGCGTCGGTGTGGGTGTTGGCGGCGGCGGCGGAGTGGTTTGGGTCGGTGGCGGCGGTGCTGGAGGGAGTAACGGCTCTCCGGGGTCGTCACCTTCAGTGCCGAAGCAAGACAAAGCTTACTTGGCTCTGCAGGCATGGAAGGCCGCGATAACAGAGGACCCATTGAGGATTCTGGAGAGTTGGAATGGTTCTAACGTGTGTTCTTATAAAGGGGTGTTTTGCGCCAATCCCGAGGATGCTTCAGGTGAGCCTGTGGTGGCCGGAATAGATCTCAACCATGCTAATCTCAGAGGAAGTCTTGTGAAGGAGCTCTCTTTACTCGCTGAAATGTCTCTTCTTCACCTCAACAGCAACAGATTCACAGGTACAGTTCCTGATACATTCAGAGACCTCTCGTCTCTTGAAGAGTTAGACATCAGCAACAACCAGCTCTCTGGTCCTTTTCCTACAGTTACTTTGTCAATGCCCAGTCTGGTTTACTTGGACATCAGATTCAACTCTTTCTCTGGACCACTCCCCGATGATCTCTTCAACAAGAATCTGGATGCTATTTTTCTCAACAACAATCAATTTGAAGGCGAAATCCCCCAAAATTTGGGCAATTCCCCTGCTTCTGTCATAAATTTAGCTAACAACAAGCTCAGTGGGAGCATACCAGCGAGTTTTGGGTTCATGGGTTCAAAGCTAAAGGAGATTCTGTTCCTCAATAACCAGTTAACAGGGTGCATTCCTGAAGGGGTTGGGATCTTCACACAGATGCAAGTTCTGGACGTGAGCTCCAATTCACTAATGGGTCATTTGCCAGACACAATATCTTGTCTGCAAGACATAGAAGTTCTGAATTTGGCGCACAACAAGCTTTCTGGGGAATTATCGGACGTGATCTGTTCACTGAGAAACCTACTGAATCTAACGGTTGCCTATAATTTCTTTTCTGGGTTCAGCCAGGAATGCTCGAGGCTTTTCGTTAGGAATGTGGGTTTTGATTTCTCAGATAATTGCATTCCTGGGAGGGACATGCAGAGACCTCGACCAGAGTGTTCTGTGATCCCTGGTGGTGGCTTAAATTGTCTCAGAATCCCAACTCCGAAGCTTGTTTGTGGTTCGCTCTCTGTAAGTTTCTCTAAGCGCGCTCATCCCAGTTCATCATCATCATCTTCTTCTTCATCACCTTGA 1269 0.4791 MVKALLILAFDLLLLLHLNLHLDAARSAFGVGVGVGVGGGGGVVWVGGGGAGGSNGSPGSSPSVPKQDKAYLALQAWKAAITEDPLRILESWNGSNVCSYKGVFCANPEDASGEPVVAGIDLNHANLRGSLVKELSLLAEMSLLHLNSNRFTGTVPDTFRDLSSLEELDISNNQLSGPFPTVTLSMPSLVYLDIRFNSFSGPLPDDLFNKNLDAIFLNNNQFEGEIPQNLGNSPASVINLANNKLSGSIPASFGFMGSKLKEILFLNNQLTGCIPEGVGIFTQMQVLDVSSNSLMGHLPDTISCLQDIEVLNLAHNKLSGELSDVICSLRNLLNLTVAYNFFSGFSQECSRLFVRNVGFDFSDNCIPGRDMQRPRPECSVIPGGGLNCLRIPTPKLVCGSLSVSFSKRAHPSSSSSSSSSSP 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1504 422 FunFam Leucine-rich repeat extensin-like protein 1 71 232 - -
Lele08g1504 422 Gene3D Ribonuclease Inhibitor 67 234 IPR032675 -
Lele08g1504 422 Pfam Leucine rich repeat 143 198 IPR001611 GO:0005515
Lele08g1504 422 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 58 413 - -
Lele08g1504 422 FunFam Leucine-rich repeat receptor protein kinase EMS1 255 348 - -
Lele08g1504 422 Gene3D Ribonuclease Inhibitor 235 371 IPR032675 -
Lele08g1504 422 Pfam Leucine rich repeat N-terminal domain 70 105 IPR013210 -
Lele08g1504 422 PRINTS Leucine-rich repeat signature 165 178 - -
Lele08g1504 422 PRINTS Leucine-rich repeat signature 305 318 - -
Lele08g1504 422 SUPERFAMILY L domain-like 72 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1504 Lele-ChrLele08 9806229 9807497 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1504 65 388 Leucine-rich Repeat extension Gene Families AT3G22800 51.077 8.24e-106 319