Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1503 ATGAAGATTGAGCAGTTGGACGATGTGGATTTCAGTAGGGACGAAGGGAGTAATGAGAATCAGATTGCAAGGGTTGACGCAAAGAGGGCGTTAGTTGGAGCAGGAGCTCGGATCCTGTTTTACCCGACGCTTTTGTATAATGTACTTCGGAACAAGATTGAAGCCGAGTTCAGGTGGTGGGATCAAGTCGATGAGTTTTTATTATTGGGCGCTGTTCCATTCCCTAAAGACGTTCCACGCTTGAAGAAGCTTGGTGTGGGTGGTGTAATTACTCTGAATGAACCTTATGAAACGTTGGTTCCATCATCATTGTACCATGCTCATGAGATTGATCATTTAGTGATTCCTACAAGGGATTATCTCTTTGCCCCTTCACTAGAGGATATTAGTCTTGCTGTGCAATTCATTCATCAAAATGCTTGTTGCGGTAAAACTACTTATGTTCATTGTAAAGCTGGTCGAGGAAGGAGCACAACAATTGTTCTTTGTTATTTGGTTGAATATAAGCACATGACACCTGTAACTGCCCTGGATTATGTGCGGTCTCGCAGACCTAGGGTGCTGCTAGTACCCTCGCAGTGGAAGGCTGTTCAAAACTACAGCAAGTGCCGACCTTCTCCTTCTAATGCCAGGCCTACTCCTACTCCTACTCCATACTCTCCTTCTAGGGATGCAGTTCTCATAACCCAAGCTGATCTCGAGGGTTATCATAACGCATGCGATGCTGGTATGCAGTTTGCCATCGTTACTAAAGTGCCAAAGGCCAAGCCCATGATAGCAAGATTATCTTGCCTGTTTGCGTCCCTTAAAGTTTCTGGCAGCAGTGTCCCAGCAATCAGGCGGTTGCCAATTTCTGAGGCACGTGCTTGCTAA 873 0.457 MKIEQLDDVDFSRDEGSNENQIARVDAKRALVGAGARILFYPTLLYNVLRNKIEAEFRWWDQVDEFLLLGAVPFPKDVPRLKKLGVGGVITLNEPYETLVPSSLYHAHEIDHLVIPTRDYLFAPSLEDISLAVQFIHQNACCGKTTYVHCKAGRGRSTTIVLCYLVEYKHMTPVTALDYVRSRRPRVLLVPSQWKAVQNYSKCRPSPSNARPTPTPTPYSPSRDAVLITQADLEGYHNACDAGMQFAIVTKVPKAKPMIARLSCLFASLKVSGSSVPAIRRLPISEARAC 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1503 290 FunFam Dual specificity phosphatase domain protein 59 206 - -
Lele08g1503 290 Pfam Dual specificity phosphatase, catalytic domain 81 201 IPR000340 GO:0008138|GO:0016311
Lele08g1503 290 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 53 201 IPR029021 -
Lele08g1503 290 ProSitePatterns Tyrosine specific protein phosphatases active site. 148 158 IPR016130 GO:0016311|GO:0016791
Lele08g1503 290 Gene3D Protein tyrosine phosphatase superfamily 59 204 IPR029021 -
Lele08g1503 290 PANTHER PHOSPHATIDYLINOSITOL PHOSPHATASE 1 268 - -
Lele08g1503 290 MobiDBLite consensus disorder prediction 201 221 - -
Lele08g1503 290 CDD PTPMT1 59 202 IPR044596 GO:0004721
Lele08g1503 290 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 127 195 IPR000387 GO:0016311|GO:0016791
Lele08g1503 290 ProSiteProfiles Dual specificity protein phosphatase domain profile. 59 206 IPR020422 GO:0006470|GO:0008138
Lele08g1503 290 SMART dsp_5 62 203 IPR020422 GO:0006470|GO:0008138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1503 Lele-ChrLele08 9799813 9801742 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1503 1 270 Protein tyrosine phosphatase (PTP) family AT2G35680 50.633 1.89e-99 293