Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1502 ATGAGCAATTTGAGCTCTGTAAACAGTTGTGATCTGATAGATGCGAAGCTTGAAGAGCATCAGTTTTGTGGATCCAAGCAGTGCCCTGGTTGCGGACACAAGTTTGAAACCAAACCGGACTGGTTAGGTCTTCCGGCTGGCGTGAAGTTTGATCCTACAGATCAAGAACTAATCGAACACCTTGAAGCCAAAGTGGAGTACAAGAACGTGAAATCTCACCCTTTGATCGATGAGTTCATTCCTACAATTGAAGGAGAAGACGGAATCTGTTATACCCATCCTGAGAAACTCCCAGGAGTAACAAGAGACGGGTTGAGTAGGCACTTCTTCCACAGGCCGTCGAAGGCTTACACGACCGGAACAAGAAAGCGGAGAAAAATACAGAATGAAAGCGAGATGCAAGGAGGAGAAACGAGGTGGCACAAGACCGGGAAGACGAGGCCGGTGATGGTGAACGGAAAGCAAAAGGGCTGCAAGAAGATTCTAGTGCTCTACACCAACTTCGGCAAGAACCGGAAACCCGAGAAGACCAACTGGGTCATGCATCAGTACCACCTCGGCCAGCAGGAGGAGGAGAAAGAAGGAGAGCTCGTCGTCTCCAAGATTTTCTACCAGACACAGCCCCGACAGTGTAATTGGTCCGATCGGAGCGCCGCCATCACCGGAGAACCCAGCGCCGACTTCGTTAATGCCAATAGTAGTAGAAGAGACAGTGGCAGTTGCTCTTCTTCTAAGGAGATCAACAACGTTGTTGTTCCAGCTCACAGAGATGATCAGATGTCGGCGGTCGTCGGGGTTGTCCCTCCCATGTCATCTTACGTTCATCATCGTCATCATGCTTTGGATATTCAACAACATCTGAAACCCGACCATTTTGGGTTCATTCCGTTCAGGAAAAGCTTCGACGAGCAGCAGCAGCAGCAGCAGCAGCAGCATAAACTAGGAGGAAGCTCTGCGTCTGGTTTGGAGGAACTCATAATGGGATGCACTTCATCAACTGATATTAAAGCGGAATCATCCGTCCCCGTCACAAACCCGCAAGAAGCCGAATGGCTCAAGTACTCCTACTGGCCCGACCCGGACAACCCGGATCATCACGGGTAA 1104 0.5009 MSNLSSVNSCDLIDAKLEEHQFCGSKQCPGCGHKFETKPDWLGLPAGVKFDPTDQELIEHLEAKVEYKNVKSHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQNESEMQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQQEEEKEGELVVSKIFYQTQPRQCNWSDRSAAITGEPSADFVNANSSRRDSGSCSSSKEINNVVVPAHRDDQMSAVVGVVPPMSSYVHHRHHALDIQQHLKPDHFGFIPFRKSFDEQQQQQQQQHKLGGSSASGLEELIMGCTSSTDIKAESSVPVTNPQEAEWLKYSYWPDPDNPDHHG 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1502 367 MobiDBLite consensus disorder prediction 125 144 - -
Lele08g1502 367 MobiDBLite consensus disorder prediction 125 145 - -
Lele08g1502 367 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 8 327 IPR044799 GO:0003700
Lele08g1502 367 SUPERFAMILY NAC domain 39 205 IPR036093 GO:0003677|GO:0006355
Lele08g1502 367 Gene3D NAC domain 53 209 IPR036093 GO:0003677|GO:0006355
Lele08g1502 367 Pfam No apical meristem (NAM) protein 45 186 IPR003441 GO:0003677|GO:0006355
Lele08g1502 367 ProSiteProfiles NAC domain profile. 44 205 IPR003441 GO:0003677|GO:0006355
Lele08g1502 367 FunFam NAC domain-containing protein 73 53 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1502 Lele-ChrLele08 9790181 9793820 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1502 10 364 NAC Transcription Factor Family AT5G56620 53.902 1.94e-130 378
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele08g1502 NAM 4.8e-24 No_clan