Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1493 ATGGGAAGAGCTCCCTGTTGCGACAAAGCTAACGTGAAAAGAGGACCATGGTCTCCTGAAGAAGATGCCACCCTCAAGAACTACCTCCACAAACATGGCACTGGTGGCAATTGGATCGCTCTCCCCAAAAAAGCTGGTCTTAAGCGTTGTGGGAAGAGCTGTCGTCTGAGATGGCTCAACTATCTTAGGCCTCATATAAGGCTCGGAGGTTTTACTGATGACGAAGACCAAATTATCTGCACTCTCTATGCTACCCTCGGAAGCAGGTGGTCTCTTATAGCTGCTCAATTGCCTGGAAGAACGGACAATGATGTAAAAAACCACTGGAACACAAAGTTGAAGAAGAAGTTTTTTGCAGGAAAAAGTTGTAATGGGACGACCATCAGCAGCAACATGAACGAGGGCAATAGTTATGTACCGTTCTTATCGTTTTCCCCTCAAACACCTCAAGGCGATGCCTTTCTGGTAGGTCACAAGGAGTCTGCAGACTATTTTGAGCATTGTGTTCTGGAGTCGGAGCAAAATAATACAGCTCCATTTTCAGGACCAAAACCACTGGAATCTCAAGTTTCAGAAGTTGGAAGCGGCATGATGATCAGTGAAAGCTGCAGGATACCATGTTCTATGCAAGTTTCATCTTCTGCAGGTTGCTTGGCAGAGAAGAACGACCATACCAAATGGGTTGGATTTAAGCATGATGATCATCACTATGAAGCAAGTGTGCCTGATCTTGTGTATGATGATCTCTTCAATGGATTTGCTTCCTGCGACCAAAGTCTCATCAACGAATGCTTCCCAAATTAA 804 0.4502 MGRAPCCDKANVKRGPWSPEEDATLKNYLHKHGTGGNWIALPKKAGLKRCGKSCRLRWLNYLRPHIRLGGFTDDEDQIICTLYATLGSRWSLIAAQLPGRTDNDVKNHWNTKLKKKFFAGKSCNGTTISSNMNEGNSYVPFLSFSPQTPQGDAFLVGHKESADYFEHCVLESEQNNTAPFSGPKPLESQVSEVGSGMMISESCRIPCSMQVSSSAGCLAEKNDHTKWVGFKHDDHHYEASVPDLVYDDLFNGFASCDQSLINECFPN 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1493 267 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Lele08g1493 267 CDD SANT 71 113 IPR001005 -
Lele08g1493 267 Gene3D - 7 68 - -
Lele08g1493 267 Gene3D - 70 136 - -
Lele08g1493 267 CDD SANT 16 62 IPR001005 -
Lele08g1493 267 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Lele08g1493 267 FunFam Transcription factor RAX3 7 68 - -
Lele08g1493 267 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Lele08g1493 267 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Lele08g1493 267 SMART sant 13 64 IPR001005 -
Lele08g1493 267 SMART sant 67 115 IPR001005 -
Lele08g1493 267 PANTHER OS09G0431300 PROTEIN 1 140 - -
Lele08g1493 267 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Lele08g1493 267 Pfam Myb-like DNA-binding domain 71 111 IPR001005 -
Lele08g1493 267 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1493 Lele-ChrLele08 9714912 9715937 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1493 1 119 MYB Transcription Factor Family AT5G57620 77.311 2.01e-69 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele08g1493 Myb_DNA-binding 1.8e-14 CL0123