Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1492 ATGATCTCACTATATCCACTATTTCCTGGGGCTGCCATAACTGCCAAGACATCGTACTTGACAATGAAAATGAAAATGTCTATCAGATTTATCTCCATGATGATGATGCTTCATCTTGTTCTTATGGCTTCAGTTCTTGGACAGCGACAGACAGGCTTCATCAGTATTGATTGTGGAGGTCCAGAGAATTTTGAATACACATATGATAGCGATGAAATAAAGTACAGCACAGATGGAGCCTACATCCAAACAGGGATTAACAAAAACATATCATCAGAATACTCATATCCAAACAATCCCAATCTACCATTACCAATATGGAACCTTGGAGCAATTAATGATATTGGTAGATATGAAGATGACATATATGACAGAATCTGGTACCCATATGGTTCATCTTCCTGGGATTCTGTCAGCACTTCTCATGCTATAAATGGAAATAACAATGGCTATAAAGCGCCATTTGAAGTGATGAGAACTGCTTCAAGACCAAAGAATGTTTTCCCAAGCTACTTAGTTGCAACCGCAGTATCGAATTTGAAACCTTTGATGGGACATGAACACCGAATTTCTCTTCGTAGAACTGAAGATTCAACCCTTCCGCCGATCCTTAACGCGGTTGAGATATTTGAAGTTAGAATGATGGATGCGTTTCCAACACTTGAGAAAGATGTTTACAACGGAGAAATTTATTTTGATAGGAATCTGAGCTCAGGCAGTTTGAGTGGGGTGATTGCTTCTGCCATCTGCAACCTCTTATCACTTGAATCATTTGTGGATTCCCAGAATCTTTGTGGCTCAGATAAGTGCAAGAAGAAGCAAAATGTATTTGTTCCCATTGTTGCTACAATATCATCACTTCTAGTTCTACTGATTGTTCTCATTATCATCTGGAAAGTTAGAAGAGATATAAAACCAGAGGTATTGGACACAACCAACAACTTTAAAATTGTTATTGGGAAAGGAGGATTTGGGACTGTGTACCGTGGTCAGATGAAAGATGGGAACCAAGTTGCAGTAAAGATGCTTTCTCCGTCATCATCTCAAGGGCCAAGGGAATTTCATACTGAGAGGCCACACTTTGGATTGGAGTATTTACACCTTGGATGCAAGACACCTATAATGCATAGAGATGTGAAGACGGCCAATATTCTTCTGAGTGAAAAGTTGGAAGCAAAGATAGCAGATTTTGGCCTCTCCAAGTTGTTTAAGAATGACACAAGAGATGTAGGATCCTCAATGAATACAAATGATCAAGAAAATTCAGAACCTGCTGTTATGGGTACCAAAGGACCTGAGATTCAAAGAGGAGATTTGAGCAAAATTGTAGATCCAAAGCTGCAAGGCAAATACAATGCATGTTCTGTGTGGAAGGCTTTAGGAGCAGCAATGGCATGTACTGCATCAGCCTCTTTTCATAGACCTACAATGAGTTGTGTGTTATCTGAGCTAAAAAAGTGTTTGGAAACAGAGGAAGAAAAGGGACCCAGTGGCTTCATTAACGCCTTGACTCCAAAGCAATAG 1524 0.3976 MISLYPLFPGAAITAKTSYLTMKMKMSIRFISMMMMLHLVLMASVLGQRQTGFISIDCGGPENFEYTYDSDEIKYSTDGAYIQTGINKNISSEYSYPNNPNLPLPIWNLGAINDIGRYEDDIYDRIWYPYGSSSWDSVSTSHAINGNNNGYKAPFEVMRTASRPKNVFPSYLVATAVSNLKPLMGHEHRISLRRTEDSTLPPILNAVEIFEVRMMDAFPTLEKDVYNGEIYFDRNLSSGSLSGVIASAICNLLSLESFVDSQNLCGSDKCKKKQNVFVPIVATISSLLVLLIVLIIIWKVRRDIKPEVLDTTNNFKIVIGKGGFGTVYRGQMKDGNQVAVKMLSPSSSQGPREFHTERPHFGLEYLHLGCKTPIMHRDVKTANILLSEKLEAKIADFGLSKLFKNDTRDVGSSMNTNDQENSEPAVMGTKGPEIQRGDLSKIVDPKLQGKYNACSVWKALGAAMACTASASFHRPTMSCVLSELKKCLETEEEKGPSGFINALTPKQ 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1492 507 SUPERFAMILY Protein kinase-like (PK-like) 302 411 IPR011009 -
Lele08g1492 507 SMART serkin_6 313 504 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g1492 507 ProSitePatterns Protein kinases ATP-binding region signature. 319 341 IPR017441 GO:0005524
Lele08g1492 507 PANTHER OS07G0107800 PROTEIN-RELATED 235 357 - -
Lele08g1492 507 Gene3D Transferase(Phosphotransferase) domain 1 420 498 - -
Lele08g1492 507 Gene3D Transferase(Phosphotransferase) domain 1 365 419 - -
Lele08g1492 507 ProSitePatterns Serine/Threonine protein kinases active-site signature. 374 386 IPR008271 GO:0004672|GO:0006468
Lele08g1492 507 Gene3D Phosphorylase Kinase; domain 1 301 364 - -
Lele08g1492 507 ProSiteProfiles Protein kinase domain profile. 124 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g1492 507 Pfam Protein kinase domain 362 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g1492 507 MobiDBLite consensus disorder prediction 409 424 - -
Lele08g1492 507 MobiDBLite consensus disorder prediction 409 439 - -
Lele08g1492 507 Pfam Malectin-like domain 111 167 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1492 Lele-ChrLele08 9707596 9712768 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1492 117 491 Receptor kinase-like Gene Family AT3G46400 26.047 6.56e-48 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lele08g1492 Pkinase 1e-11 CL0016