LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele08g1480	ATGAGTCGCCGATATAACAACAATAGGAGCTCAAGCGGCAGCATCAGTAAAATGAGTCACCACACTCGCTTCGAAGATGCAGACGAAATCATTGAGGATGCTGCTGTGAGCTCCAACCACGACGACTCCATGTGCGAGCTAGATGGTTCCGTAGACAAAGCCGTTGAAGGCTCAGCTGGCGAGCCTTCCACGGTCTTTACCGGTTCAGATGATAAAACAAGTGCCGATTATTACTTTGATTCCTACTCTCACTTTGGTAATTTCTTATTCGGAATTTTTCCTTTACTATGTGTCTTACGTTCTGATAATGGAACTAGTAAAAGCTTCGTTGGGTTTACTTTACCTCTATTCTCTAACCCACTTTACATGCAGGAAATGTTGAAGGATACTGTTAGAACTAAGACATACCAAAATGCGATCTATCAGAATAAGTTTTTATTCAAGAATAAAGTAGTTCTTGATGTGGGTGCTGGGACTGGAATTTTATCTCTCTTCTGTGCCAAAGCTGGGGCAGAACATGTCTATGCGGTGGAATGCTCTGACATGGCTGACATGGCAAAGGAGATAGTTGAAACTAATGGATACTCTAATGCTATAACAGTTCTGAAGGGAAAGATTGAAGAAATTGATCTTCCTGTTGCTAAAGTTGACATAATAATTTCAGAATGGATGGGATACTTCTTGTTGTTTGAGAATATGCTTAATACTGTTCTCTATGCACGTGACAAGTGGCTAGTGGATGATGGAGTTGTGCTACCAGATAAAGCGTCTCTATATCTTACTGCAATCGAAGATGCAGACTATAAAGAAGATAAAATTGAGTTTTGGAATAATGTATATGGATTTGACATGAACTGCATTAAGAAGCAAGCAATTATGGAGCCTCTTGTGGACACAGTTGACAAAAATCAGATTGTTACAAATTGCCAACTACTCAAGACAATGGATATCTCTAAAATGGTACCTGGAGATGCGTCCTTCACAGCACCTTTTAAGCTTGTAGCTGAACGTGATGATTATATTCATGCTCTTGTGGCATATTTTGACGTATCATTTACCAGGTGTCATAAATTGATGGGCTTCTCTACAGGGCCAAGATCCCGTGCGACTCATTGGAAGCAAACAGTGCTTTACCTAGAAGACGTTGTGACCATATGTGAGGGAGAGGCCATTGCGGGAAGCATGACCGTGTCACAAAATGAGAAAAATCCTCGAGATGTTGACATAATGCTCACGTATTCATTAAATGGTCGACGATGCATGGTTTCAAGAGTTCAGTATTACAAGATGCGCTGA	1296	0.4082	MSRRYNNNRSSSGSISKMSHHTRFEDADEIIEDAAVSSNHDDSMCELDGSVDKAVEGSAGEPSTVFTGSDDKTSADYYFDSYSHFGNFLFGIFPLLCVLRSDNGTSKSFVGFTLPLFSNPLYMQEMLKDTVRTKTYQNAIYQNKFLFKNKVVLDVGAGTGILSLFCAKAGAEHVYAVECSDMADMAKEIVETNGYSNAITVLKGKIEEIDLPVAKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGVVLPDKASLYLTAIEDADYKEDKIEFWNNVYGFDMNCIKKQAIMEPLVDTVDKNQIVTNCQLLKTMDISKMVPGDASFTAPFKLVAERDDYIHALVAYFDVSFTRCHKLMGFSTGPRSRATHWKQTVLYLEDVVTICEGEAIAGSMTVSQNEKNPRDVDIMLTYSLNGRRCMVSRVQYYKMR	431

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele08g1480	431	MobiDBLite	consensus disorder prediction	1	18	-	-
	Lele08g1480	431	FunFam	Blast:Protein arginine N-methyltransferase 1	255	431	-	-
	Lele08g1480	431	PANTHER	PROTEIN ARGININE N-METHYLTRANSFERASE	35	418	IPR025799	GO:0016274\|GO:0018216
	Lele08g1480	431	Gene3D	Vaccinia Virus protein VP39	66	253	IPR029063	-
	Lele08g1480	431	CDD	AdoMet_MTases	152	252	-	-
	Lele08g1480	431	ProSiteProfiles	SAM-dependent methyltransferase PRMT-type domain profile.	109	412	IPR025799	GO:0016274\|GO:0018216
	Lele08g1480	431	Gene3D	-	255	431	-	-
	Lele08g1480	431	MobiDBLite	consensus disorder prediction	1	21	-	-
	Lele08g1480	431	FunFam	probable protein arginine N-methyltransferase 1	101	253	-	-
	Lele08g1480	431	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	117	430	IPR029063	-
	Lele08g1480	431	Pfam	Ribosomal protein L11 methyltransferase (PrmA)	147	222	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele08g1480	Lele-ChrLele08	9644776	9653832	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele08g1480	124	394	C2H2 Transcription Factor Family	AT3G12270	37.884	6.74e-58	198