Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1476 ATGAATGAAGACCATATCATCGGTGTCTGTCCCGAACAAGTTTCGATGCAGACGACCCCAGTGAGGCAATCATCATCATCCTCAAACGAGGTTGTCATTTCAATGGACGAAATCAGTGTATCCATGGAAGATACAGCAGCAAATGCTACGTATCTAGAAGCAGCAGCATTATCATCGGGAGAGATGAGACAGTGCCGTTTTTGTCATGAGGAAGACTTTGTCAGACACCTGGAAGCACCCTGTGGTTGCACTGGCACCCTGAGGTACGCCCACAGGAGTTGCACCGCCGCTTGGTGCAACACCAAGGGCGACATCATGTGCCAGATTTGCGAGCAGCCCTATGGTCCCGATTATGCTGTGACTGAAGTCTCGTCGAGCCTGCAGACGAGTAGTAGTCCGAGTACTCCGACCACCATTACGCAGGTGCAATCCCCTCTGCAGCTACCAGACCATAGGGTACCTGATCTTTCTCGCTGGGCCCACTTGATGGTTCCCTGTCGTGGCTTACTCTACGCCACCTTGCTTATCCTTTTCCTGGTGGTACTGATAGTGAATGATGTATTCACCGTGACGAAGACGACCAAAAAGGAGCTGAGAAAAGCCTTCTACATCATATTCGTGGTTATTATGATGCTTCTCATACCCTTCGCTCTCCTGTCATGCATTTACGAATGCCAGTTATGCCCAGATTCGCGAGCACTTGGAGGAAAGGAACCGGAGAGCCCAGGTGGGACAAGTCGGAGCATATAG 750 0.5067 MNEDHIIGVCPEQVSMQTTPVRQSSSSSNEVVISMDEISVSMEDTAANATYLEAAALSSGEMRQCRFCHEEDFVRHLEAPCGCTGTLRYAHRSCTAAWCNTKGDIMCQICEQPYGPDYAVTEVSSSLQTSSSPSTPTTITQVQSPLQLPDHRVPDLSRWAHLMVPCRGLLYATLLILFLVVLIVNDVFTVTKTTKKELRKAFYIIFVVIMMLLIPFALLSCIYECQLCPDSRALGGKEPESPGGTSRSI 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1476 249 PANTHER RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING 37 225 IPR033275 -
Lele08g1476 249 CDD RING_CH-C4HC3_MARCH 65 112 - -
Lele08g1476 249 ProSiteProfiles Zinc finger RING-CH-type profile. 57 117 IPR011016 GO:0008270
Lele08g1476 249 SMART ringv_2 64 111 IPR011016 GO:0008270
Lele08g1476 249 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 51 124 IPR013083 -
Lele08g1476 249 Pfam RING-variant domain 65 110 IPR011016 GO:0008270
Lele08g1476 249 SUPERFAMILY RING/U-box 60 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1476 Lele-ChrLele08 9610763 9612269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1476 24 102 C3H Transcription Factor Family AT1G50440 37.647 5.13e-07 47.4