Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1474 ATGGACTTAACCTCCACCGCAATTCACAACATCGCCTCCTCCACTACTACCGCTACTAAATCCCCAGAACCAGACAGTGAAATTCCGACCCGGGTCCAACCCGCCCCCGCTAAGTCCTTGTCCTTCTCCAACGGCGTCCTGAAGCGCCATCAGCCCCACCACAAACATCCCGTGCCGGTCACCTACAAAGAATGCTTGAAAAACCATGCAGCCAGCTTGGGAGGCCACGCCCTCGACGGTTGTGGCGAGTTCATGCCTTCTCCGAACGCCAATTCTGCCGACCCCAGCTCCATCGTATGCGCCGCCTGTGGCTGCCACCGCAATTTCCATCGCCGTGAGCCCGAGGAGCCCATCTCCACCGCCACCCACGTCATCGAGTATCAGCCCCACCATCGGCACCACCCTCCGCCACCTCCGCCATTCCAAGCTCCGAATCGGAGCCCCAATTCAGCTTCCCCGCCCCCGATCTCATCCTCCTACTACCCCTCCGTCCCCCACATGCTCCTGGCTCTCTCTGCTGGTTTATCGGCCCATCCGGAGAGCACGGCCGCTCCGGCGAATATCTTGGGGACGCCGACTTTGAATTCTAGGAAGCGGTTCAGGACCAAGTTCACACAAGAGCAGAAGGATAAAATGTACCAGTTCGCTGAGAGAGTGGGGTGGAAGATGCAGAAGAGAGACGACGAATTGATGCAAGAGTTCTGCCACGATGTCGGGGTTGATAGAAGCGTTTTGAAGGTTTGGATGCACAATAACAAGAACACTTTGGGGAAGAAAGTTGCCATGAATGGGAATCTTGAGGTAGACCAAAACGACAATCACGACAATGAAATCACCGGCAACAAAAACACCACCACCACCAACAACAACAACGGCAGCACCCCCCAGGATCCGAATCATCACTACCAGAACGATAGTGGGGCAAACGCCGTTACTAATGGGTCGTCTTCGTCTTCTTAA 960 0.5552 MDLTSTAIHNIASSTTTATKSPEPDSEIPTRVQPAPAKSLSFSNGVLKRHQPHHKHPVPVTYKECLKNHAASLGGHALDGCGEFMPSPNANSADPSSIVCAACGCHRNFHRREPEEPISTATHVIEYQPHHRHHPPPPPPFQAPNRSPNSASPPPISSSYYPSVPHMLLALSAGLSAHPESTAAPANILGTPTLNSRKRFRTKFTQEQKDKMYQFAERVGWKMQKRDDELMQEFCHDVGVDRSVLKVWMHNNKNTLGKKVAMNGNLEVDQNDNHDNEITGNKNTTTTNNNNGSTPQDPNHHYQNDSGANAVTNGSSSSS 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1474 319 MobiDBLite consensus disorder prediction 134 151 - -
Lele08g1474 319 SUPERFAMILY Homeodomain-like 192 258 IPR009057 -
Lele08g1474 319 MobiDBLite consensus disorder prediction 1 37 - -
Lele08g1474 319 Pfam ZF-HD protein dimerisation region 60 114 IPR006456 -
Lele08g1474 319 MobiDBLite consensus disorder prediction 277 319 - -
Lele08g1474 319 MobiDBLite consensus disorder prediction 271 319 - -
Lele08g1474 319 Gene3D - 191 258 - -
Lele08g1474 319 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 62 113 IPR006456 -
Lele08g1474 319 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 41 256 - -
Lele08g1474 319 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 197 254 IPR006455 -
Lele08g1474 319 MobiDBLite consensus disorder prediction 128 158 - -
Lele08g1474 319 MobiDBLite consensus disorder prediction 1 26 - -
Lele08g1474 319 FunFam Zinc-finger homeodomain protein 2 187 258 - -
Lele08g1474 319 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 61 113 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1474 Lele-ChrLele08 9595686 9596645 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1474 11 253 ZF-HD Transcription Factor Family AT5G15210 55.378 2.03e-76 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Lele08g1474 ZF-HD_dimer 4.5e-28 No_clan