Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1471 ATGGTTCAGCGGCTCACATATCGTAAGCGTCACAGCTACGCCACTAAATCCAATCAGCACAGGGTCGTCAAAACCCCTGGTGGTAAGTTGGTGTATCAGACTACAAAGAAGAGAGCGAGTGGACCAAAGTGTCCTGTTACTGGGAAGAGGATCCAAGGGATTCCACACTTGAGACCTGCTGAATACAAGAGGTCTAGATTGCCAAGGAACCGTCGGACGGTCAACCGGGCCTATGGAGGTGTATTGTCTGGAGGTGCTGTGAGAGAAAGGATAATCCGGGCGTTCTTGGTGGAAGAGCAAAAGATTGTGAAAAAGGTTAGCAGGGCTTGA 330 0.5 MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLPRNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVSRA 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1471 109 ProSitePatterns Ribosomal protein L34e signature. 15 28 IPR018065 -
Lele08g1471 109 Gene3D - 1 37 - -
Lele08g1471 109 PANTHER 60S RIBOSOMAL PROTEIN L34 1 106 IPR008195 GO:0003735|GO:0005840|GO:0006412
Lele08g1471 109 Gene3D - 39 108 - -
Lele08g1471 109 Pfam Ribosomal protein L34e 1 96 IPR008195 GO:0003735|GO:0005840|GO:0006412
Lele08g1471 109 PRINTS Ribosomal protein L34 signature 44 54 IPR008195 GO:0003735|GO:0005840|GO:0006412
Lele08g1471 109 PRINTS Ribosomal protein L34 signature 26 43 IPR008195 GO:0003735|GO:0005840|GO:0006412
Lele08g1471 109 PRINTS Ribosomal protein L34 signature 13 26 IPR008195 GO:0003735|GO:0005840|GO:0006412
Lele08g1471 109 PRINTS Ribosomal protein L34 signature 66 88 IPR008195 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1471 Lele-ChrLele08 9562485 9564499 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1471 1 106 Cytoplasmic Ribosomal Protein Gene Family AT1G69620 93.396 3.83e-69 201