Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1466 ATGGCTAAATATCTATCTTCCCCCATTTTAAGGGGCTTTCACTCCTACTGAGAGAACCGACTTCCTTGCCCAGATCTTCTTCCTCATGCCATTGTACCACGAATTAGTCTGAACTTTGAAATCTCTGAGTCTGAATCATTTTTCCATCCTTTCTCACTTTGGAGGACTGTGTTTTGTGGTGTGGTAATGGCGGAAGCTGCTGCAGAGCCCAAAGCAGTGGCGGAGGCAGAGAAGAAGAAGGAGCAGAGTTTACCCTTTTATCAGCTCTTCTCTTTCGCAGATAAGTATGACTGGCTGCTCATGATCTCTGGCAGCTTGGGAGCTGTCATTCATGGCTCCTCCATGCCGGTTTTCTTCCTTCTTTTCGGTGAAATGGTTAATGGGTTTGGCAAGAACCAGATGGATTTGAAGAAAATGACAGACGAAGTATCAAAGTATGCTCTGTATTTTGTGTACCTGGGTCTTGTCGTTTGCGCATCATCGTATGCGGAAATTGCTTGTTGGATGTATACCGGGGAGAGGCAAGTGAGCACGTTGAGGAAGAAGTATTTGCAGGCAGTGCTTAAACAGGACGTTGGGTTCTTCGACACAGACGCTAGAACAGGGGATATTGTTTTCAGTGTCTCCACTGATACTCTGCTTGTTCAAGATGCTATTAGCGAGAAGGTAGGGAACTTTATACACTATCTATCAACTTTTCTGGCGGGTTTAGTGGTTGGTTTTGTGTCGGCATGGAGACTGGCTCTTCTGAGTGTGGCGGTGATTCCCGGCATTGCTTTCGCCGGCGGCTTGTACGCTTATACACTCACTGGCCTCACTTCAAAGAGTCGTCAATCCTATGCCAATGCCGGCATAATCGCCGAGCAGGCAATTGCTCAAGTTCGAACTGTTTACTCATACGTTGGAGAGAGCAAGGCCCTTAATTCTTATTCTGATGCTATACAAAACACACTGAAGCTTGGATATAAGGCTGGAATGGCGAAAGGTTTGGGTTTAGGATGCACATATGGTATAGCATGTATGTCTTGGGCTTTAGTCTTTTGGTATGCCGGTGTCTTCATCAGGAATGGACAGACCGACGGAGGCAAGGCTTTTACGGCCATTTTCTCCGCCATTGTTGGTGGCATGAGTTTGGGACAGTCGTTTTCAAATTTAGGAGCGTTCAGTAAAGGTAAAGCTGCTGGATACAAGTTGATGGAGATTATCAATCAGAGACCTTCCATAGTGGAAGGTGCATCAGACGGAAAGTGCTTGCCTGAGGTTCATGGGAATATCGAATTCAAAGATGTCACTTTCAGCTATCCATCTAGGCCTGACGTTATTATCTTTCGCAATTTCTCGATCTTTTTTCCTGCGGGGAAAACAGTGGCCGTTGTTGGCGGAAGTGGGTCGGGAAAGAGTACTGTGGTTTCACTGATAGAGAGGTTCTATGATCCTAACGAAGGGCATGTTTTACTGGATAATGTAGACATAAAGACACTAGAGTTAAGATGGTTACGTAGTCAAATTGGACTGGTGAATCAAGAACCTGCACTCTTTGCAACTAGCATTCTTGAGAATATACTTTACGGAAAACCTGATGCAACCATGGCTGAAGTTGAAGCTGCTGCTTCTGCTGCAAACGCTCATAGCTTCATAACCTTGCTTCCAAATGGCTATAACACTCAGGTGGGAGAGCGAGGGGTTCAATTGTCAGGGGGTCAAAAACAGAGGATTGCAATAGCGAGAGCTATGTTGAAGAATCCAAAGATTCTTCTTTTAGATGAAGCTACCAGTGCTCTTGATGCAGGCTCTGAAAGTATTGTGCAAGAAGCACTAGACCGGCTTATGGTTGGACGTACGACTGTAGTTGTCGCCCACCGTCTGTCCACCATAAGAAACGTGGACTCCATTGCCGTTATCCAACAAGGACAAGTAGTTGAGACAGGGACGCATGAAGAGCTGATTGCCAAGGCAGGGACTTATTCGTCACTGATTAGATTCCAAGAAATGGTCGGAAACAGAGACTTGTCCAACCCATCAACTCGCCGGACGCGTTCATCTAGGCTGAGCCACTCGCTTTCCACCAAGTCTTTGAGCCTCCGGTCCGGGAGCTTGAGGAATCTGAGCTACCAGTACAGCACCGGAGCAGATGGTCGGATTGAGATGGTATCAAATGCAGAAACGGACAAGAAAAATCCGGCTCCTCAGGGTTATTTCTTCCGACTGCTCAAGTTAAATGCCCCAGAATGGCCATACTCAATCGTGGGAGCTGTAGGCTCTGTTCTCTCTGGGTTCATCGGCCCCACATTTGCCATCGTGATGAGCAACATGATCGAGGTATTTTACTACAAGAACTACGCATCCATGGAGAAAAAGACCAAGGAGTTTGTTTTCATATACATCGGAGCTGGTCTTTATGCCGTGGGGGCGTATTTGATACAACATTACTTCTTCAGTATCATGGGAGAAAATCTCACCACAAGGGTTCGAAGAATGATGATTGCCGCAATATTAAGGAATGAAGTTGGATGGTTCGATGAGGAGGAGCACAATTCTAGCCTGGTTTCTGCGAAGTTAGCGACGGATGCTGCGGATGTGAAGTCGGCGATTGCTGAGAGGATCTCAGTGATTCTGCAGAACATGACGTCTCTGTTAACTTCATTTATAGTAGCTTTTATCGTGGAATGGAGGGTTTCTTTGCTCATCCTCGCAACCTTCCCTTTACTTGTTCTGGCTAATTTTGCCCAGCAACTATCTCTGAAAGGGTTTGCGGGAGACACAGCGAAGGCACATGCAAAGACGAGTATGATCGCCGGAGAAGGAGTGAGCAACATCAGAACAGTCGCCGCATTCAACGCTCAGAACAAGATCCTATCTCTCTTCTGCCACGAGCTTCATGTCCCACAGCGCCGAAGCCTCCGTCGCAGCCAAACTTCCGGCCTCCTCTTCGGTCTCTCCCAGCTCGCTCTTTACGCCTCCGAAGCTCTCATTCTTTGAACAGGGGAGCCATGGGGAGCTGGTGAGCCGACCGGAGGGGGCATATTCCAGACTCTTGCGGCTACAGCAGCATCGCATATGATGAAGACGGTTTGA 3075 0.4732 MAKYLSSPILRGFHSYXENRLPCPDLLPHAIVPRISLNFEISESESFFHPFSLWRTVFCGVVMAEAAAEPKAVAEAEKKKEQSLPFYQLFSFADKYDWLLMISGSLGAVIHGSSMPVFFLLFGEMVNGFGKNQMDLKKMTDEVSKYALYFVYLGLVVCASSYAEIACWMYTGERQVSTLRKKYLQAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKVGNFIHYLSTFLAGLVVGFVSAWRLALLSVAVIPGIAFAGGLYAYTLTGLTSKSRQSYANAGIIAEQAIAQVRTVYSYVGESKALNSYSDAIQNTLKLGYKAGMAKGLGLGCTYGIACMSWALVFWYAGVFIRNGQTDGGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKAAGYKLMEIINQRPSIVEGASDGKCLPEVHGNIEFKDVTFSYPSRPDVIIFRNFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNEGHVLLDNVDIKTLELRWLRSQIGLVNQEPALFATSILENILYGKPDATMAEVEAAASAANAHSFITLLPNGYNTQVGERGVQLSGGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRNVDSIAVIQQGQVVETGTHEELIAKAGTYSSLIRFQEMVGNRDLSNPSTRRTRSSRLSHSLSTKSLSLRSGSLRNLSYQYSTGADGRIEMVSNAETDKKNPAPQGYFFRLLKLNAPEWPYSIVGAVGSVLSGFIGPTFAIVMSNMIEVFYYKNYASMEKKTKEFVFIYIGAGLYAVGAYLIQHYFFSIMGENLTTRVRRMMIAAILRNEVGWFDEEEHNSSLVSAKLATDAADVKSAIAERISVILQNMTSLLTSFIVAFIVEWRVSLLILATFPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQNKILSLFCHELHVPQRRSLRRSQTSGLLFGLSQLALYASEALILXTGEPWGAGEPTGGGIFQTLAATAASHMMKTV 1024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1466 1024 Gene3D ABC transporter type 1, transmembrane domain 88 995 IPR036640 GO:0005524|GO:0016020
Lele08g1466 1024 Pfam ABC transporter 444 592 IPR003439 GO:0005524
Lele08g1466 1024 FunFam ABC transporter B family member 19 415 663 - -
Lele08g1466 1024 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 104 390 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele08g1466 1024 ProSitePatterns ABC transporters family signature. 564 578 IPR017871 GO:0005524|GO:0016887
Lele08g1466 1024 SUPERFAMILY ABC transporter transmembrane region 729 996 IPR036640 GO:0005524|GO:0016020
Lele08g1466 1024 CDD ABC_MTABC3_MDL1_MDL2 425 662 - -
Lele08g1466 1024 PANTHER ABC TRANSPORTER B FAMILY 65 760 - -
Lele08g1466 1024 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 416 662 IPR027417 -
Lele08g1466 1024 SMART AAA_5 452 644 IPR003593 -
Lele08g1466 1024 FunFam ABC transporter B family member 1 88 419 - -
Lele08g1466 1024 CDD ABC_6TM_Pgp_ABCB1_D2_like 737 1021 - -
Lele08g1466 1024 FunFam ABC transporter B family member 1 727 1021 - -
Lele08g1466 1024 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 748 995 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele08g1466 1024 SUPERFAMILY ABC transporter transmembrane region 89 410 IPR036640 GO:0005524|GO:0016020
Lele08g1466 1024 CDD ABC_6TM_Pgp_ABCB1_D1_like 101 398 - -
Lele08g1466 1024 Pfam ABC transporter transmembrane region 106 375 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele08g1466 1024 Pfam ABC transporter transmembrane region 748 995 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele08g1466 1024 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 425 661 IPR003439 GO:0005524
Lele08g1466 1024 Gene3D - 415 663 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1466 Lele-ChrLele08 9520540 9527676 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1466 70 990 Calmodulin-binding Proteins AT2G36910 50.799 0.0 932