Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1464 ATGTTGAAGAGATCCATGTCGTTTTCAGGGATGGAGAACAAGCATGAAGATGAAGAGCTTTCCGATGATGGATCTCAGATGATGGGGGAGAAGAAGAAGAGACTGAACATTGAACAGGTGAAGGCACTGGAAAAGAGCTTCGAGTTAGGGAACAAGTTGGAGCCTGAACGCAAAACGCAGCTGGCCAGGGCTCTAGGCCTTCAGCCAAGGCAGATCGCTATCTGGTTCCAGAATAGGAGGGCCAGATGGAAAACCAAGCAGCTCGAGAAGGAATATGAAGCTCTCAAGAGGAAGTTTGATGATCTCAAGGCCGATAACGATGCCCTTAAGTCTCATAACCACAAGTTACACGCTGAGTTACAAGCTCTAAAGGGGAGAGATTGCTGTGAAGTAGGAGGAACTATCAACCTTATCAACCTTAAGAAAGAACCTGAGGTATGTTGGAGCAATGGGAGTACTGAGAATAGCTCGGATATTAACTTGGATCTCTCAAGATCACAATTTATGAACAGCACTGTAACTTCAGTACAGAATGGTAAAAGCCTTCTTAAGCCCACCAGCATAACCCAGCTCCTCCAATGCTCATCAAGGTCATCAGAACTTCAAGATGAAAGCTTCTCCAACATGTTTCACGGCGGCGCCGGCGTCCATGAGCACCAGAACTTCTGGCCCTGGCCAGAGCACCACCAGTTTCATTGA 699 0.4707 MLKRSMSFSGMENKHEDEELSDDGSQMMGEKKKRLNIEQVKALEKSFELGNKLEPERKTQLARALGLQPRQIAIWFQNRRARWKTKQLEKEYEALKRKFDDLKADNDALKSHNHKLHAELQALKGRDCCEVGGTINLINLKKEPEVCWSNGSTENSSDINLDLSRSQFMNSTVTSVQNGKSLLKPTSITQLLQCSSRSSELQDESFSNMFHGGAGVHEHQNFWPWPEHHQFH 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1464 232 PRINTS Lambda-repressor HTH signature 57 66 IPR000047 GO:0003677
Lele08g1464 232 PRINTS Lambda-repressor HTH signature 66 82 IPR000047 GO:0003677
Lele08g1464 232 CDD homeodomain 31 87 IPR001356 GO:0003677
Lele08g1464 232 ProSiteProfiles 'Homeobox' domain profile. 26 86 IPR001356 GO:0003677
Lele08g1464 232 Pfam Homeodomain 31 84 IPR001356 GO:0003677
Lele08g1464 232 MobiDBLite consensus disorder prediction 1 32 - -
Lele08g1464 232 ProSitePatterns 'Homeobox' domain signature. 61 84 IPR017970 GO:0000981|GO:0006355
Lele08g1464 232 Coils Coil 78 112 - -
Lele08g1464 232 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 5 186 IPR045224 GO:0003700
Lele08g1464 232 SUPERFAMILY Homeodomain-like 26 88 IPR009057 -
Lele08g1464 232 Pfam Homeobox associated leucine zipper 86 125 IPR003106 GO:0006355|GO:0043565
Lele08g1464 232 MobiDBLite consensus disorder prediction 9 32 - -
Lele08g1464 232 SMART HOX_1 29 90 IPR001356 GO:0003677
Lele08g1464 232 Gene3D - 23 97 - -
Lele08g1464 232 FunFam Homeobox-leucine zipper protein ATHB-13 22 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1464 Lele-ChrLele08 9493262 9494619 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1464 1 225 Homeobox Transcription Factor Family AT3G01220 51.852 5.25e-69 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele08g1464 Homeodomain 8.3e-16 CL0123