Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1463 ATGGCTGGTGCTTTGGACCTGGCAAAACCGAAGGGAAAGAAGGCAAATGACGTCGAAGCTAGACGTCCGAAATGGTTGTTGAAACTGAGTCTCGTCGTCGGAAGATGCTTATTTTTGAAGAAGTCCAAAGAGGACGACGACGGCTCTGCAGAAAGCGATTACTCTACCAAGAAATCCGATCCCGGAGCTGCAGCACCATTACCCTTGTCGCACTTCGAGGAAATAAAATTTGCTTCTAATCTTAGAAGGTTTTCTTTTGATGAGCTGAAGGAAATCACTCATAATTTTAAACCCAGCAGTATTCTTGGCCAAGGGGGTTTTGGTTGTGTTTTTAAAGGTCTGATCAAACAAGCAAGATCAACTGGTTCGAGCATTCCAGCTGCAGTCAAGATTCTTAACATTGCAGGACTTCAAGGCCACAGAGAATGGCTTACTGAAATTAATTATCTGGGCGCACTTCAGCATCCGAATCTAGTTAAATTAATAGGTTACTGCATTGAGGAAGAGAAAAGGGTGCTGGTGTACGAGTTTATGCCTCGAGGAAGCTTGGACAACCACCTGTTTAGGAGGACTACGCCCCTTCCATGGAGGATGAGATTGAAAATTGTGATTGGTGCTGCGAAGGGCCTTGCGTTTCTGCATGAAGAAGCTGACAGAACAGTGATTTTCAGGGACTTCAAAACATCTAATATACTTCTGGATTCGGAATATAATGCAAAACTTTCTGATTTCGGACTTGCCAAAGATGGTCCTGAGGGTGATTCAACACATGTGTCTACTCGAGTGATGGGAACATTTGGGTATGCAGCTCCTGAGTATGTCATGACAGGACACCTGACTGTGAAGAGTGACGTGTACAGCTTCGGCGTGGTTCTGCTAGAATTGCTGACTGGGCGAAAGGCCATGGACAAGAACCGTCCAAGAGGTGAGCACAACCTGGTTGAATGGGCAAGGCACAGCTTTGAAGACAGAAGGAGATCCTACTCCTACAAGCTCATCGATCCTCGCCTTCAGGGTTATTTCTCCATGAAAGCTTCTCAGACAGCGTTCCAGTTGGCTGCTCGCTGCCTTTCCCGCCAACCCAAATCAAGACCCACCATGTCCGAGGTTGTCCACATCTTGGAGCCCTTGCCCGAACTAAACGATATGTATATCTTCTCCTCCTCTTTCAAGTTCATGCCTCCTCATGGACCATCCCACCCTGGATCGTCCTCCTCCAGGAGCTTGCCAAACTCACCGTTTCGCCCACACTATCCGCTGCCGTTTCCGAGTCCAAAGGCAATTGTCCCATGA 1293 0.4741 MAGALDLAKPKGKKANDVEARRPKWLLKLSLVVGRCLFLKKSKEDDDGSAESDYSTKKSDPGAAAPLPLSHFEEIKFASNLRRFSFDELKEITHNFKPSSILGQGGFGCVFKGLIKQARSTGSSIPAAVKILNIAGLQGHREWLTEINYLGALQHPNLVKLIGYCIEEEKRVLVYEFMPRGSLDNHLFRRTTPLPWRMRLKIVIGAAKGLAFLHEEADRTVIFRDFKTSNILLDSEYNAKLSDFGLAKDGPEGDSTHVSTRVMGTFGYAAPEYVMTGHLTVKSDVYSFGVVLLELLTGRKAMDKNRPRGEHNLVEWARHSFEDRRRSYSYKLIDPRLQGYFSMKASQTAFQLAARCLSRQPKSRPTMSEVVHILEPLPELNDMYIFSSSFKFMPPHGPSHPGSSSSRSLPNSPFRPHYPLPFPSPKAIVP 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1463 430 FunFam Serine/threonine-protein kinase PBS1 178 386 - -
Lele08g1463 430 SUPERFAMILY Protein kinase-like (PK-like) 81 408 IPR011009 -
Lele08g1463 430 ProSiteProfiles Protein kinase domain profile. 96 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g1463 430 ProSitePatterns Protein kinases ATP-binding region signature. 102 130 IPR017441 GO:0005524
Lele08g1463 430 MobiDBLite consensus disorder prediction 44 65 - -
Lele08g1463 430 Gene3D Transferase(Phosphotransferase) domain 1 178 387 - -
Lele08g1463 430 FunFam Serine/threonine-protein kinase BIK1 68 177 - -
Lele08g1463 430 PANTHER OS01G0588500 PROTEIN-RELATED 56 377 - -
Lele08g1463 430 Pfam Protein tyrosine and serine/threonine kinase 100 374 IPR001245 GO:0004672|GO:0006468
Lele08g1463 430 Gene3D Phosphorylase Kinase; domain 1 76 177 - -
Lele08g1463 430 CDD STKc_IRAK 102 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1463 Lele-ChrLele08 9477831 9481674 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1463 73 374 Glycoside Hydrolase AT3G07070 50.814 4.45e-100 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele08g1463 PK_Tyr_Ser-Thr 6e-49 CL0016