Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1455 ATGGAGACAACGGTGATGATTAAAAGTGAAGAGAGCAAAAGGAGCCAACTCATGGCAGAAGATCAGTTCCAAGGAACTTGTTATGTCAAGAGACGGCGAAGAGAGACTTATGCAGCTGCACTTAATAACAGTGAAGCTCCAAGAGATCAGGGGCAACAGCAGCAGCAGCCACAGCTGCAGGGTGATCAAAATTTAAGTACTAGCACTATGAAAAGAAGTTCAAGATTTCATGGTGTAAGCAGACATCGATGGACTGGTCGATTTGAAGCTCACCTGTGGGACAAGCTCTCTTGGAACGTAACACAGAAGAAGAAAGGGAAGCAAGGCAATCCGAAGATGACAATATTTTCATGTTTCACTGGGGCTTACGGGGAAGAGGAATCAGCAGCAAGGGCGTACGATTTAGCAGCACTGAAGTACTGGGGAACATCAACTTTAACTAATTTTCCGATATCAGATTACCAGCAAGAGATAGAAATAATGGAGACCATGACCAAAGAGGAGTACTTGGCTACTTTAAGAAGGCCTCCTATCGGCACCCAAGAGGAAGCTGCTCGTGCTTATGACATAGCAGCCATTGAGTACAGAGGGATCGATGCGGTGACAAACTTTGATTTGAGTACTTACATAAGATGGTTGAAGCCTACAAGAGAAAACATCCAAGAAGCAATACCCGAATCCCAGGTGGTACCCGAGGCTCAGGCAGAGACAACATCCCCATTTAGCTACACTCCAAAAGAGGAGAAGAAATCCATGACCCTTCACAGTAATTCTTTCACAGCTTACCTGAACTCCCCTTGTACGCAAGATTTAATTGAAAGCAAAGCCCCTATAATCTCGAGCAATACCAATAAGGCATCTTCTCCTACTGCCCTTGGCCTTCTTTTTCGATCTTCAATATTCAGAGAACTGATCAAAAAGAACCCAAACATATCTGGAGATGAAACTGATGGATAA 957 0.441 METTVMIKSEESKRSQLMAEDQFQGTCYVKRRRRETYAAALNNSEAPRDQGQQQQQPQLQGDQNLSTSTMKRSSRFHGVSRHRWTGRFEAHLWDKLSWNVTQKKKGKQGNPKMTIFSCFTGAYGEEESAARAYDLAALKYWGTSTLTNFPISDYQQEIEIMETMTKEEYLATLRRPPIGTQEEAARAYDIAAIEYRGIDAVTNFDLSTYIRWLKPTRENIQEAIPESQVVPEAQAETTSPFSYTPKEEKKSMTLHSNSFTAYLNSPCTQDLIESKAPIISSNTNKASSPTALGLLFRSSIFRELIKKNPNISGDETDG 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1455 318 CDD AP2 74 152 IPR001471 GO:0003700|GO:0006355
Lele08g1455 318 ProSiteProfiles AP2/ERF domain profile. 139 205 IPR001471 GO:0003700|GO:0006355
Lele08g1455 318 SUPERFAMILY DNA-binding domain 179 207 IPR016177 GO:0003677
Lele08g1455 318 Gene3D AP2/ERF domain 74 152 IPR036955 GO:0003700|GO:0006355
Lele08g1455 318 Gene3D AP2/ERF domain 154 207 IPR036955 GO:0003700|GO:0006355
Lele08g1455 318 MobiDBLite consensus disorder prediction 38 78 - -
Lele08g1455 318 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 179 251 - -
Lele08g1455 318 ProSiteProfiles AP2/ERF domain profile. 75 150 IPR001471 GO:0003700|GO:0006355
Lele08g1455 318 MobiDBLite consensus disorder prediction 43 74 - -
Lele08g1455 318 SMART rav1_2 75 156 IPR001471 GO:0003700|GO:0006355
Lele08g1455 318 SMART rav1_2 163 211 IPR001471 GO:0003700|GO:0006355
Lele08g1455 318 Pfam AP2 domain 75 142 IPR001471 GO:0003700|GO:0006355
Lele08g1455 318 SUPERFAMILY DNA-binding domain 74 152 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1455 Lele-ChrLele08 9429439 9434943 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1455 71 209 AP2-EREBP Transcription Factor Family AT5G17430 45.506 4.41e-44 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele08g1455 AP2 3.5e-09 CL0081