Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1449 ATGGGATTTGGGAATCATGCAATTCAAGCTGGAAGTTTGGACGTGGGCAAGTCAAATGGAAGGAAGAAGAAAGATGGTGCAGAGAAGCATAGTGGGTGTTGGGCTAAATTCAGTTGCATCGGAAGCTGCATACCTTCTAGATCAAAGATTGATAACTACATAAGTGGTGGTCCAAGCGCCGCCCATAATGTGGAAAACAGATGTACAAATGAAAATACCAAAGATCGAACAGTTGCTCATCCAGAGTCCTCCACTACCACTAGTTATGCAGGAAGTGTACCCTCAACTCCAAAATTCAGTGAGGAGTTGAAGGTTTCTTCTCGTTTGAGAAAATTCACGTTCAATGAACTCAAAATGGCTACTAGGAATTTCAGACCAGAGAGTCTTCTTGGCGAAGGAGGGTTTGGTTGTGTCTTCAAAGGTTGGGTTGAAGAGAATGGAACTGCACCTGTCAAACCGGGTACTGGCCTTACTGTTGCAGTGAAGACCCTCAACCATGATGGACTTCAGGGTCACAAAGAGTGGCTTGCTGAGCTGAATTACCTTGGTGATCTTGCCCACACTAATCTGGTTAAATTGATCGGCTTCTGTATTGAAGATGACCAAAGATTATTGGTTTATGAATTTATGCCCCGAGGAAGTTTAGAGAACCATCTCTTTAGAAAAGGGCCCTTGCCTCTTCCTTGGTCTATCAGAATGAAAATTGCACTTGGAGCTGCGAAAGGTCTTGCCTTTCTCCATGAAGAAGCTCAGAGGCCCATAATATATCGAGATTTCAAGACATCTAATATCCTATTAGATGCGGAATACAATGCCAAGCTTTCTGATTTCGGACTTGCCAAAGATGGTCCTGAGGTTGGAAAGACCCATGTATCAACAAGAGTTATGGGAACATATGGTTATGCAGCTCCAGAATATGTGATGACTGGACATTTGACATCAAAAAGTGATGTTTATAGTTTCGGGGTAGTGCTCCTTGAAATGCTTACCGGTCGGCGAGCAATTGACAAAAATAGACCAAATGGGGAACACAACCTGGTGGAATGGGCAAGACCTGCTCTTGGAGACCGGAGGATATTCTACCGGATAATCGATCCTCGTCTTGAAGGTCACTTCTCGGTTAAAGGTTCACAGAAAGCCGCCCAACTGGCTGCTCGATGCCTTAGCCGTGATCCAAAATCTAGACCCATGATGAGTGAAGTTGTTCAAGTTCTTAAGCCTTTGCCAAACCTTAAGGATATGGCTATTTCATCTCAATACTTCCAGTTTACACGAGTAGATCGCACCATGTCGATGCCAAATCCCAAAAATGGTTCAAAAACACAGCTAACATCTGTATCAAGGAAAGGTCAACCTGTAAGGATCTTGTCGAGCCCTAACGGGCCACGTGGTTCTCCATATCATCATTATTCCAAGTCACCAAAACCTAATGGGTGA 1437 0.4398 MGFGNHAIQAGSLDVGKSNGRKKKDGAEKHSGCWAKFSCIGSCIPSRSKIDNYISGGPSAAHNVENRCTNENTKDRTVAHPESSTTTSYAGSVPSTPKFSEELKVSSRLRKFTFNELKMATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAELNYLGDLAHTNLVKLIGFCIEDDQRLLVYEFMPRGSLENHLFRKGPLPLPWSIRMKIALGAAKGLAFLHEEAQRPIIYRDFKTSNILLDAEYNAKLSDFGLAKDGPEVGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRAIDKNRPNGEHNLVEWARPALGDRRIFYRIIDPRLEGHFSVKGSQKAAQLAARCLSRDPKSRPMMSEVVQVLKPLPNLKDMAISSQYFQFTRVDRTMSMPNPKNGSKTQLTSVSRKGQPVRILSSPNGPRGSPYHHYSKSPKPNG 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1449 478 MobiDBLite consensus disorder prediction 429 454 - -
Lele08g1449 478 PANTHER OS01G0588500 PROTEIN-RELATED 80 408 - -
Lele08g1449 478 FunFam Probable serine/threonine-protein kinase PBL8 210 425 - -
Lele08g1449 478 ProSiteProfiles Protein kinase domain profile. 124 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g1449 478 Gene3D Phosphorylase Kinase; domain 1 98 209 - -
Lele08g1449 478 MobiDBLite consensus disorder prediction 1 28 - -
Lele08g1449 478 MobiDBLite consensus disorder prediction 71 96 - -
Lele08g1449 478 Pfam Protein kinase domain 127 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g1449 478 Gene3D Transferase(Phosphotransferase) domain 1 210 427 - -
Lele08g1449 478 ProSitePatterns Protein kinases ATP-binding region signature. 130 162 IPR017441 GO:0005524
Lele08g1449 478 SUPERFAMILY Protein kinase-like (PK-like) 98 405 IPR011009 -
Lele08g1449 478 MobiDBLite consensus disorder prediction 79 96 - -
Lele08g1449 478 CDD STKc_IRAK 130 408 - -
Lele08g1449 478 FunFam Serine/threonine-protein kinase BIK1 92 209 - -
Lele08g1449 478 ProSitePatterns Serine/Threonine protein kinases active-site signature. 254 266 IPR008271 GO:0004672|GO:0006468
Lele08g1449 478 MobiDBLite consensus disorder prediction 429 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1449 Lele-ChrLele08 9382140 9386341 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1449 58 421 Glycoside Hydrolase AT3G07070 49.728 4.93e-115 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele08g1449 Pkinase 1.6e-46 CL0016