Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1440 ATGGATGTTCTTTGCTTGGATGACAGCAGAGAAGGCATTGAAGGGAAATCTTTTGAGAGGTCCCCTACATCAAGTTCCTCTGATATGGATGCTAAATTTGGAGACTCTGAAGTGCTTCCTCGTGTTGGAGATCAATATCAGGCCAAAATTCCTCCATTAGTTACATCACCTTGTTCTTCTGAGCTTATAAACGAGTTTAGAGATTCAGAAGTCATGGTGAATATGCCAGAGTTACTGGGACTACCCATTCCTCTTATGAGGGCTTGTTCTAAAGCTGAAAGCAGTCGAGAAGCTTTAGAATCTTTCATCAGTGAAGATGAACAAGTTATTTCTGAGAATGATTGTGTTCAATTTAAAGTTGAACCTCAGACTAATTTTCTTGGAGAGGGAAAAAATGTCACTGGAGTTTTAAGTTTTCAGTCTTCTTCTAAATGTGATGATGAGATGGGTACTGATTCATTTCCAAAACTGGAAATTAAGTTGGATGAGGCACAAGACATGTATCTTATCCCTGAATCGCAAGTAGAATCTTGGACTGTCACTGAATATGACAGTTTTCTGCTTGGCCTCTATGTCTTCGGGAAAAAATTTAATTTTGTAAAGAGATTTGTTGGGAGTAAAAAAATGGGACACATACTATCCTTCTATTATGGAAAGTTTTATAGGTCTGAAAACTTTCGGCGATGGTCAGATTGTCGGAAGATGAGAAATAAGCGGTGTACATTTGGGCAAAAGATATTCACAGGGTGGAGGCAACAAGAACTGCTGTCAAGATTATTTTCTCATGTGTCAAAGGAGTGTCAGAATACATTGGTAGAGCTTGCTAGGAATTTTGTGGAGGGAAAGATGCCTTTTGAAGAATATGTATTTGCTTTAAAGAACACTGTTGGTGTTGGCATGTTGATAGATGCTGTTGGTATTGGCAAAGGAAAGCATGATCTCACTGGCACTGCTGTTGAGCCGACAAAGATCAGACATGTCTTCTCTATTCATCGCGAAATTCCAATCGGCAAAGCTTGCTCCTCTCTTTCATCTGCAGACATAATCAAGTTCTTGACAGGAGGTTTTAGGTTAAGCAAAGCTCGATCTAGTGATCTTTTCTGGGAAGCTGTTTGGCCTCGTCTTTTGGCAAAAGGATGGCGCTCTGAGAAGCCTAAGGATTATATGCCTTCTGGTTCATCAAAACAATCTCTGGTTTTCCTTACTCCTGGTGTTAAGAAATTTTCAAGATGGAAACTGGTGAAAGGTAACCACTACTTCGATTCTGTAAGCGATGTACTGAATAAAGTAGCATCTGAACCAGGGCTTCTTGAGAATGAAATTGAAGTGACTGAGGGCAGAGTAAACGGTGAAAATGGACTGGACAAAGACAAACAGGACATGAATGGTTTGTTAAATAAGCAGCAACGTCGTTACCTTCAACCTCTTAATTCAACTTGCAATCAAATGAAATTCACTATTGTGGATACCAGCATAGTATATGATTTGCAGAATTGCAAAGTGAGAGAGCTGAGAAGTTTACCTCTTGAAACTTTAAATATATCCACTTTAATTAGCCATTCTTCTTGTGAATCAGAGCAGCAAGATACATCTGAAGAAACAGAAGATCAATCTGAACAAACTAATTCTTCATGCCCTGCAGTGGAGTTTGCAGACCAGGGGACGAGCGCCGAGTCAAAAGATTGTACTCCTATACCTGAAGCACCGAATGCTGACGAACTAGTAGTAGAATATCATAAATGTGGTTCTGATCTGCATAATGATGAGAATTCAGAGGAGAACAATGGCTCCCATTTCATTCAAAATGTTTCATCTAGTTGCTCTTCACCCCCCATGAATCTTGAAGAACTTAGACACTGCAATGAAAGCACTCCTATAGGCAGAAAGTTGGATTTAAATGAGCCTACTTCACCATCAAATCTGTGTGATGCATCAGAGGGGTTGTTTCTTTCTGTGGATTTACAAAACATGTCTTCCCCAAGTTCTCTAGTTAAGGGCAATCCAAGTACTCAGAAGCACCTAGAAGGAGAAGAATGTGCAGAAAAGCCTAAAACCAGAATGTTGATTGACTTAAACCTTCCTCATGTTCCACCCGAGGTGGGAACCGACATGGAAATCGAAATACCATCTTTTGTTGTCGAGCTGCAAAATAATGACATTCAATATGCAAGTTCCTCATCCTCATCATACGATAAAACCAACCTCAATCAGATAGATCAGAAGCTTCCTGATGTTCATAAAGAGCAGCAGCAACCTAACATTGTCAGTCGTCGCCAGAGTACAAGAAACCGACCATTGACCACAAAAGCACTGGAAGCTCTAGAGTACAGCCTTCTGAACTCAAAGAGGAAGAGAAAGAATGTGGAAAACACATACCATAACTCAAAGTCACAATGTTTACGAACAAGTGGGGGAGCAACTATTAGTGTTACAAGTAATAATGGCACTGATAATGTTATGTCACAGGAAGTAAATGCACTCCAGGCACATAGCACAAGCAGTCTTAGCAGCGAGTCTCGCTATAATGTCTGA 2532 0.4017 MDVLCLDDSREGIEGKSFERSPTSSSSDMDAKFGDSEVLPRVGDQYQAKIPPLVTSPCSSELINEFRDSEVMVNMPELLGLPIPLMRACSKAESSREALESFISEDEQVISENDCVQFKVEPQTNFLGEGKNVTGVLSFQSSSKCDDEMGTDSFPKLEIKLDEAQDMYLIPESQVESWTVTEYDSFLLGLYVFGKKFNFVKRFVGSKKMGHILSFYYGKFYRSENFRRWSDCRKMRNKRCTFGQKIFTGWRQQELLSRLFSHVSKECQNTLVELARNFVEGKMPFEEYVFALKNTVGVGMLIDAVGIGKGKHDLTGTAVEPTKIRHVFSIHREIPIGKACSSLSSADIIKFLTGGFRLSKARSSDLFWEAVWPRLLAKGWRSEKPKDYMPSGSSKQSLVFLTPGVKKFSRWKLVKGNHYFDSVSDVLNKVASEPGLLENEIEVTEGRVNGENGLDKDKQDMNGLLNKQQRRYLQPLNSTCNQMKFTIVDTSIVYDLQNCKVRELRSLPLETLNISTLISHSSCESEQQDTSEETEDQSEQTNSSCPAVEFADQGTSAESKDCTPIPEAPNADELVVEYHKCGSDLHNDENSEENNGSHFIQNVSSSCSSPPMNLEELRHCNESTPIGRKLDLNEPTSPSNLCDASEGLFLSVDLQNMSSPSSLVKGNPSTQKHLEGEECAEKPKTRMLIDLNLPHVPPEVGTDMEIEIPSFVVELQNNDIQYASSSSSSYDKTNLNQIDQKLPDVHKEQQQPNIVSRRQSTRNRPLTTKALEALEYSLLNSKRKRKNVENTYHNSKSQCLRTSGGATISVTSNNGTDNVMSQEVNALQAHSTSSLSSESRYNV 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1440 843 MobiDBLite consensus disorder prediction 520 547 - -
Lele08g1440 843 MobiDBLite consensus disorder prediction 1 17 - -
Lele08g1440 843 PANTHER ATROPHIN-RELATED 14 784 - -
Lele08g1440 843 Gene3D - 171 230 - -
Lele08g1440 843 SUPERFAMILY Homeodomain-like 176 223 IPR009057 -
Lele08g1440 843 MobiDBLite consensus disorder prediction 1 31 - -
Lele08g1440 843 Coils Coil 771 791 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1440 Lele-ChrLele08 9298192 9301465 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g1440 08 9298192 9301465 Lele08g1440 08 9298192 9301465 ECH
Lele05g1571 05 10079660 10089263 Lele08g1440 08 9298192 9301465 hybridization
Lele06g1436 06 9354215 9357453 Lele08g1440 08 9298192 9301465 hybridization