Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1434 ATGGTACGTCACGACAGAACCCTAATTCCAAAACTACGTTTTCGAAATTCCAAGCCCGCCAAGCCTCCGCTTTCTCCACCCCCCTTTAGGTCTCCCGCTATTCCGATTGCGTCGTTCGAAGGATCTTCCTCAGCTAGCTTCTTGCTCCACTCTTTGTTGGATATGTCTTCATCTGTTCCTCAAGAATCTGATTCCACCCCACAGATCTACTCCCGGAAAGACAAGTCACTTGGATTACTTAGCTTCAACTTCTTCAAGCTATATAACCGCGAAGGTATTGGGACGATTGGACTTGACGATGCTGCCTCCCGACTAGGAGTTCAGCGTCGCCGCATGTATGATGTAGTCAACATATTGGAGACTGTTGGAGGGAAAAATCTATACCTATGGAAAGGTTTCAGAGAAATTCCTCGAGCTTTGAACGAGCTTAAGGAAGAGGGTATGAGAGAAAAAATTGATGCAGCCTACACCAGGTCAGCTGAAGCATCAAAGAACAAAGAAACCGGTGGTTCTGGAACTAAAACTGATCCTCTGGCAATGGCATTGCCCAAAACTGACAGCTGCAGAAGAGACAAATCTCTAGCACTTTTGACGGAGAATTTCATAAAACTCTTCCTCTGTTCAAATGTTGAAATTATCTTGCTTGAAGATGCTGCAAAGATAATGCCGGGTGATGCCCAGAATTCAACTGCCTTGAGAACAAAAGTCAGACGTTTATATGACATAGCAAATGTCCTTTCATCTGTCAATCTGATCGAGAAGACAAATCATCCCGAGCATAGGAAAACAGCATATAGGTGGTTAGGAGGGAAATCCAGTACAGAATCTGATGGTATCTTGGGTCAAAGTGCATCCAGGAAGAGAGTGTTTGGAGCGGAAATTACAAATTATAGCTTAAAGAGAAATAAAACAGATTCTTCAATGGATTCGCAGTCCCATGAAAAGATTATGCAAGTGTGTAAAAAACAAGATGATTTGGAAAATGAATACATATGTAAAACTTTGGAGCAGCCCCCTAAATGCAGTTCAAAGGCCATAGACTTTGGCCCTTTTGCTCCTGTCAAGTTTAGAAGAGGAGATCCAGAGCAGACATACGAGACAGGAAGAGGTGAGAGTGCCCTTGACCCAATTGTGAAGGATAAGTTTGTTGATGGTGTGACAGCTCTGAGAGTGAGCGACCTCGTTGCTCATTACGTGGATGCGTGGAAGTCTTGGCTCGTTGAAGCTTCAGCGCGGCCACATGTTCTGATTCATTGGGAGTGA 1263 0.4418 MVRHDRTLIPKLRFRNSKPAKPPLSPPPFRSPAIPIASFEGSSSASFLLHSLLDMSSSVPQESDSTPQIYSRKDKSLGLLSFNFFKLYNREGIGTIGLDDAASRLGVQRRRMYDVVNILETVGGKNLYLWKGFREIPRALNELKEEGMREKIDAAYTRSAEASKNKETGGSGTKTDPLAMALPKTDSCRRDKSLALLTENFIKLFLCSNVEIILLEDAAKIMPGDAQNSTALRTKVRRLYDIANVLSSVNLIEKTNHPEHRKTAYRWLGGKSSTESDGILGQSASRKRVFGAEITNYSLKRNKTDSSMDSQSHEKIMQVCKKQDDLENEYICKTLEQPPKCSSKAIDFGPFAPVKFRRGDPEQTYETGRGESALDPIVKDKFVDGVTALRVSDLVAHYVDAWKSWLVEASARPHVLIHWE 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1434 420 FunFam E2F transcription factor-like E2FE 184 271 - -
Lele08g1434 420 Pfam E2F/DP family winged-helix DNA-binding domain 73 123 IPR003316 GO:0005667|GO:0006355
Lele08g1434 420 Pfam E2F/DP family winged-helix DNA-binding domain 191 269 IPR003316 GO:0005667|GO:0006355
Lele08g1434 420 MobiDBLite consensus disorder prediction 157 178 - -
Lele08g1434 420 PANTHER TRANSCRIPTION FACTOR E2F 58 353 IPR015633 GO:0000978|GO:0006357
Lele08g1434 420 SMART E2F_TDP_2 72 132 IPR003316 GO:0005667|GO:0006355
Lele08g1434 420 SMART E2F_TDP_2 189 269 IPR003316 GO:0005667|GO:0006355
Lele08g1434 420 Gene3D - 183 271 IPR036388 -
Lele08g1434 420 Gene3D - 66 134 IPR036388 -
Lele08g1434 420 SUPERFAMILY "Winged helix" DNA-binding domain 71 130 IPR036390 -
Lele08g1434 420 SUPERFAMILY "Winged helix" DNA-binding domain 191 269 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1434 Lele-ChrLele08 9261487 9265485 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1434 55 409 E2F-DP Transcription Factor Family AT3G01330 43.989 8.41e-89 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF E2F-DP Lele08g1434 E2F_TDP 1e-17 CL0123