Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1425 ATGATGGGCAAAGCTTCACTGGATCTCAGGAATTGCCTTCTGCTGCTATTGTGCAGCTCCATGGGCTTATGGGGTTTTGCTGCGTCGGAGGTTGAAGATGACGTGAAATGCCTCAAGGGCATCCAAGATTCGTTCGGTGGTCCTGATGGGAAGCTTTCAACTTGGCAATTCAACAACAACACACCCGGCTTCATTTGCCGATTCAACGGCGTTACGTGCTGGAATGATCAGCAGAATCGCATCATCAATCTGGTTCTCAATACTATGGAGCTCTCCGGTCGCGTGCCAGAGTCCTTGAAGTACTGTGCTAGTCTGCAGCGACTGGATCTTGGGTCCAACGACCTATATGGTGAGATCCCCAATGAGCTTTGTGTTTGGATGAAGTATTTAGTGAGCCTTGACTTGTTGGCAAATCGTCTTTCTGGACCTATTCCCCCTTCTCTCGGGAATTGCTCGTATTTGAATGAGTTAAGCCTTTCCGGTAATCAGCTTTCAGGTCTTATCCCTGTCGAAATTGGGAGCTTGACTAGGCTTACAAAGTTTTCTGTTGCTAATAATCATCTTGAGGGTGCGATTCCTTTGTCTTTAAGTCGGTTTGACAAGGAGAACTTTGAGGGGAACAGTGGGCTTTGCGGGGATCCTCTTGGATCTAAGTGTGGAGGGCTGAGTAAGAAGAATCTTGCCATCATAATAGCTGCTGGGGTGTTTGGTGCAGCTGCTTCTTTATTACTGGCTTTTGGGCTTTGGTGGTGGTACCATTTGAGATTGAGTAAGAAGGGGTTTGGAGACGGAGCAAGTGATAATTGGGCTGTGAGATTGAGGGGTTACAAGCTTGTGCAAGTCACCCTGTTCCAAAAACCCCTTGTGAAGGTTAAACTAGGCGATTTGATGGCGGCTACCAACAATTTCAGTGCAGAAAACATTCTTGTCTCAACAAGAACAGGAACTACTTACAAAGCAGATCTTCCTGATGGGTCAACCCTTGCAGTCAAACGGCTCAACACATGTAAAATCTTGGCGAAGCTCTTTCACGTTGAGATGAATAGGCTAGGCCTAGTCAGGCATCCGAATTTGGCACCGCTTTTGGGATTCTGTTTAGTGGACGAGGAAAAGTTTCTGGTTTACAAGTACATGTCAAATGGAACTCTCTTCTCCTTGTTGCACAAAAACGGCGATGCATTGGACTGGCCCACGAGATTCGGAATAGGCTTGGGGGCAGCTAGGGGTCTTGCTTGGCTGCATCATGGGTGCCATCCTCCTATTATACACCAGAATATCTGTTCCAATGTGATTCTTGTTGATGAAGATTTTGATGCTCGTTTGATGGACTCTGGACTTGCCCGCCTTATAACATCTGACTCTGAAGGGACTAGTTTTGTGAATGGAGACTTGGGGGAACTTGGCTATATGGCTCCAGAATATCCTAGCACTCTGGTTCCTTCACTAAAAGGAGATGTTTATGGATTTGGGATTGTGCTTTTGGAGTTGGTCACCGGGCAGAAACCTCTAGAAGTCAGCATCGGAGAGGAACAAGTTAAGGGTAATTTAGTGAATTGGGTGAATACGCTTTCTAATTCTGGTCTCATCAAGGATTGCATTGACAGGGCCATAAGAGGAAAGGGACACGATGAGGAAATTTTGCAGTTTCTGAGAATTGCATGTAACTGTGTGGTTTCTCATACTAAGGATAGGTTGTCTATGTACCAGGTTTATCATTCGTTGAAGAGTCTGTCTAAGGACCAAAGTTTTTCGGAGCATGATGATGAATTTCCACTGATCTTCGGGAAGCCTAATGATGAATCAGCTTAG 1809 0.4577 MMGKASLDLRNCLLLLLCSSMGLWGFAASEVEDDVKCLKGIQDSFGGPDGKLSTWQFNNNTPGFICRFNGVTCWNDQQNRIINLVLNTMELSGRVPESLKYCASLQRLDLGSNDLYGEIPNELCVWMKYLVSLDLLANRLSGPIPPSLGNCSYLNELSLSGNQLSGLIPVEIGSLTRLTKFSVANNHLEGAIPLSLSRFDKENFEGNSGLCGDPLGSKCGGLSKKNLAIIIAAGVFGAAASLLLAFGLWWWYHLRLSKKGFGDGASDNWAVRLRGYKLVQVTLFQKPLVKVKLGDLMAATNNFSAENILVSTRTGTTYKADLPDGSTLAVKRLNTCKILAKLFHVEMNRLGLVRHPNLAPLLGFCLVDEEKFLVYKYMSNGTLFSLLHKNGDALDWPTRFGIGLGAARGLAWLHHGCHPPIIHQNICSNVILVDEDFDARLMDSGLARLITSDSEGTSFVNGDLGELGYMAPEYPSTLVPSLKGDVYGFGIVLLELVTGQKPLEVSIGEEQVKGNLVNWVNTLSNSGLIKDCIDRAIRGKGHDEEILQFLRIACNCVVSHTKDRLSMYQVYHSLKSLSKDQSFSEHDDEFPLIFGKPNDESA 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1425 602 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 378 596 - -
Lele08g1425 602 Pfam Leucine rich repeat N-terminal domain 32 74 IPR013210 -
Lele08g1425 602 SUPERFAMILY L domain-like 31 201 - -
Lele08g1425 602 FunFam Nuclear pore complex protein NUP107 31 194 - -
Lele08g1425 602 Gene3D Phosphorylase Kinase; domain 1 264 377 - -
Lele08g1425 602 SUPERFAMILY Protein kinase-like (PK-like) 280 574 IPR011009 -
Lele08g1425 602 Gene3D Ribonuclease Inhibitor 31 221 IPR032675 -
Lele08g1425 602 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 264 377 - -
Lele08g1425 602 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 80 576 - -
Lele08g1425 602 Pfam Protein tyrosine and serine/threonine kinase 324 572 IPR001245 GO:0004672|GO:0006468
Lele08g1425 602 Gene3D Transferase(Phosphotransferase) domain 1 378 597 - -
Lele08g1425 602 ProSiteProfiles Protein kinase domain profile. 303 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1425 Lele-ChrLele08 9187892 9189700 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1425 12 600 Receptor kinase-like Gene Family AT3G28450 61.333 0.0 736
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Lele08g1425 PK_Tyr_Ser-Thr 3.1e-27 CL0016