Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1419 ATGGACAAGCCACCACCCGAGAATGCTGACCACAATGATGCTGAATCTTCCATTGCTAATAGCCTCCGGGACCTCAATGTTAGTGGCAGTGCTAGTATTAGTATGTGTAGTAGTAGTAGCAACGTTGAGACTCAGAGAAGCACTGGATCTATGACGGATTGTGAAGTCAGTGAGGGAAGTTTTAGGAGTTTTAGCCCTTCGAAGCCTCATAAGGGGAACGATATTAGGTGGGATGTGATACAATGTGTGAAGGGGAAAGATGGGGAATTGGGGTTGGGGCATTTCAGGCTGTTGAAGAAGCTGGGTTTTGGGGATATCGGGAGTGTGTATTTGGCTGAGCTCAGAGGAATGGGTTGTTTGTTCGCAATGAAGGTTATGGATAAGAACATGTTGGCTGGTAGGAAGAAATTGGCGAGAGCTCAGACTGAGAGAGACATTTTGGGTTTATTGGACCATCCTTTTCTTCCTTCCCTTTATTCACATTTTGAGACTGAGAAGTTCTCTTGCTTGCTCATGGAGTTTTGCAGTGGTGGGGATCTTCATACCCTCCGCCAGCGCCAGCAGGGCAAGTATTTCTCAGAGCAAGCTGCCAGGTTTTACGCTTCTGAAGTGCTTCTTGCTCTGGAGTATCTACACATGATGGGAGTGGTGTACAGAGACTTGAAGCCAGAAAACGTACTTGTAAGAGAAGATGGGCATATCATGCTCTCTGATTTTGACTTATCGCTAAGATGCTGTGTAAGTCCCACCCTTGTTCAGTCAAGTAAAGAACCATCTTGTCAGATATCGTCCTACTGCATTCAGCCATCTTCATGCGTCGATGCACGCTGCAAATTACCCGCTTGCGTGGAGCCTTCATGCCTGCAACCATCTTGCTTCAAGCCCCATTTCTTCACATCAATAAAGACCAACAAACCAAAGAGTGAAAAACACAGTTCAGCGAATTCAGACTCATTCCCAGTACTAATTGCTGAGCCAACTGATGCTCGCTCTATGTCATTCGTTGGGACTCATGAATATCTAGCTCCTGAAGTTATAAGAGGTGATGGTCATGGAAGTGCAGTGGATTGGTGGACATTTGGTGTTTTCCTGTATGAATTGTTGTTTGGGAAGACCCCATTTAAAGGCAATGGGAATCGAGAAACTTTGTTCAATGTCGTTGGTCAGAATCTGAAGTTTCCTGAGGGATCAAGCATCAGTTTTGCAGCGAAGGATTTGATAAGAGGATTGCTTGTGAAAGATCCACAGAAGAGACTTGGATTCAAAAGAGGAGCCACAGAGATCAAACGACATCATTTCTTTGAAGGTATTAATTGGGCTCTCATTCGCAGCATTCATCCGCCTGAGATCCCAAAACCACTAGATCTTTCATTTATGAATCAGACATCCAAGTCACCTTCAGTGCCTCCTTGTGAAAAAGGGGCTGCTACAACTGATTCAGACAGGGCCTCTTCGGGTCCATACTTGGATTTTGAATTCTTTTAG 1485 0.4498 MDKPPPENADHNDAESSIANSLRDLNVSGSASISMCSSSSNVETQRSTGSMTDCEVSEGSFRSFSPSKPHKGNDIRWDVIQCVKGKDGELGLGHFRLLKKLGFGDIGSVYLAELRGMGCLFAMKVMDKNMLAGRKKLARAQTERDILGLLDHPFLPSLYSHFETEKFSCLLMEFCSGGDLHTLRQRQQGKYFSEQAARFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCCVSPTLVQSSKEPSCQISSYCIQPSSCVDARCKLPACVEPSCLQPSCFKPHFFTSIKTNKPKSEKHSSANSDSFPVLIAEPTDARSMSFVGTHEYLAPEVIRGDGHGSAVDWWTFGVFLYELLFGKTPFKGNGNRETLFNVVGQNLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKRHHFFEGINWALIRSIHPPEIPKPLDLSFMNQTSKSPSVPPCEKGAATTDSDRASSGPYLDFEFF 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1419 494 SUPERFAMILY Protein kinase-like (PK-like) 69 464 IPR011009 -
Lele08g1419 494 Gene3D Transferase(Phosphotransferase) domain 1 327 452 - -
Lele08g1419 494 Gene3D Transferase(Phosphotransferase) domain 1 175 244 - -
Lele08g1419 494 SMART serkin_6 95 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g1419 494 PANTHER FLIPPASE KINASE 1-RELATED 35 456 - -
Lele08g1419 494 ProSitePatterns Serine/Threonine protein kinases active-site signature. 216 228 IPR008271 GO:0004672|GO:0006468
Lele08g1419 494 ProSiteProfiles Protein kinase domain profile. 95 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g1419 494 CDD STKc_phototropin_like 94 455 - -
Lele08g1419 494 MobiDBLite consensus disorder prediction 1 21 - -
Lele08g1419 494 Pfam Protein kinase domain 96 244 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g1419 494 Pfam Protein kinase domain 331 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g1419 494 Gene3D Phosphorylase Kinase; domain 1 94 174 - -
Lele08g1419 494 FunFam Serine/threonine-protein kinase D6PK-like 93 178 - -
Lele08g1419 494 FunFam serine/threonine-protein kinase D6PK-like 329 452 - -
Lele08g1419 494 FunFam serine/threonine-protein kinase D6PK-like 179 246 - -
Lele08g1419 494 MobiDBLite consensus disorder prediction 461 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1419 Lele-ChrLele08 9152749 9154759 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1419 1 494 AGC Kinase Gene Family AT5G40030 69.515 0.0 687
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lele08g1419 Pkinase 4.9e-37 CL0016