Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1415 ATGTCACACACTGGATGTGCTGCGTGCAAACGCCAAAGAAGAAGATGCTCAGAATACTGCATTTTCGCTCCATATTTTCCGGCAAATCAACCCCAAAGATTTGAAATGGTTCACCGTAAGTTTTGCTACGCCGGCATCGAACGTATAATGAGGCAGGTTCCTCTAGAACAAAGGGAAGATGCCATGCAAAGCATTATATACGAATCCCTATGGAGAGTGCAACGCCCAGTTCATGGATGTGTTGTCGTAAGAGAGTATTTCGTATCTCACCTTGCAAAAGCATACGCTGAATTAAAACATCTGAAAGCGATTCTTTCCTTCTTGCGAACACAACAATTACAACCCCAAGATCTTGCAGTTTTTCAAGACAATTTTGTGATTCTTTTTATTGATCGTCTTGGTATATGTGTCTCTGAGCCTAGATCTTTAACTCAAGCAATGTGA 444 0.4144 MSHTGCAACKRQRRRCSEYCIFAPYFPANQPQRFEMVHRKFCYAGIERIMRQVPLEQREDAMQSIIYESLWRVQRPVHGCVVVREYFVSHLAKAYAELKHLKAILSFLRTQQLQPQDLAVFQDNFVILFIDRLGICVSEPRSLTQAM 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1415 147 Pfam Lateral organ boundaries (LOB) domain 6 102 IPR004883 -
Lele08g1415 147 ProSiteProfiles LOB domain profile. 4 105 IPR004883 -
Lele08g1415 147 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1415 Lele-ChrLele08 9098663 9099254 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1415 1 117 AS2 family AT3G26660 36.752 1.76e-26 94.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele08g1415 LOB 8.2e-29 No_clan