Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1373 ATGTTGAGAAAGACCGGGGCGGTGTTTGGTGGCCCTGCCTTGAAACGACACGATGATCAGCTTAAATGCCAAAATTCTAGTGCCGTATCGAAGGGGAGACCACAGACAGAAACAGAGCCGTCTCTGACCAAAGAAGCTGCCCTGCCCCTGCCCCCGAACAAATTCTGCCACTTTCTCTTTGTGCAAGAAGGTAGAGGTGGGTGGTTTTGGCATTGTGGTCTTGGAGAAATGAAGGAGAAGGCAGATTCCCCTGTTGGGGTTCTTGAGGACTATTTTAGGAGCTCAGAATCAGATACAAGTTCCTCCAGAGAACCCACCGTAGATTCAGATCAGTCTCAAGATAAGTCAAAATTTGCTTCTAAATGGCGTGGATTTCTGCAGAATCTGACAAAAGGGTCTAAAAAACCCGTACCCGCCACCATGAATCCTCCTCCTCTAACTGTCTTCAAGCTGTCTAAGAGATTGAGCAGAAGCGTGAGAGAGACAATATTTCCAAGTTCTCGCTTAGGTGCAGATTCTTCTCTCCACAATTCTCCATGGAAGATCTTCACTCACAGGGAAATTCTACTTGCAACCAGTTCCTTCAGTCAAGAAAACCTTATTGGAAAAGGTGGGTATGCTGAAGTTTACAAAGGTTGTTTGCCAAATGGTCAGCTAGTAGCAATTAAGAAGCTGACACGTGGAACCCAAGATGAGATTATAGGTGACTTCTTATCAGAACTTGGTATAATGGCACACGTTAATCATCCCAATACTGCAAAACTAGTAGGCTATAGCGTTGAAGGAGGCATGCACATTGTTCTTGAATTCTCTGAAAAAGGAAGCTTAGCTTCAGTACTTCACGGTTCCAAGGAAAACCTGCCATGGTGTATTAGGTATAGCATTGCTTTAGGAACAGCCAAGGGTATACTATATCTGCACGAGGGTTGTCAGAGAAGAATTATCCACAGAGATATAAAGGCCGCGAATATCTTACTCACAGAGAATTACGAGCCACAGATTTGTGATTATGGACTGGCAAAATGGCTGCCTGAGAACTGGACCCACCACACCGTTTCAAAATTCGAAGGAACCTTTGGTTATCTTGCTCCAGAGTACTTGCTTCATGGCATAGTAGACGAGAAAACAGATGTATTTGCATTCGGTGTTCTTCTCTTAGAATTAGTCACTGGTAGGCGAGCCCTTGATTATTCACAGCAAAGCCTTGTTTTGTGGGCAAAACCATTGTTGAAGAAGAACAGAATCAGGGAGCTGATTGATCCATCACTAGGTGATGCGTTTGATACTCGACAGATGAATCTTGTAGTGTTGGTCGCTTCTTTGTGTATACACCAGTCCTCCATTCGCAGACCCTCAATGAGACAGATTGTGCAGCTTCTGAATGGTAATCTTAGCAGCTTTAAGAGCATGAAGAAGAGTCGATTGCCATTTTTCCGAAAGCTATTTCAGGAGGAGCTTCTTGATTCTGAATAG 1473 0.442 MLRKTGAVFGGPALKRHDDQLKCQNSSAVSKGRPQTETEPSLTKEAALPLPPNKFCHFLFVQEGRGGWFWHCGLGEMKEKADSPVGVLEDYFRSSESDTSSSREPTVDSDQSQDKSKFASKWRGFLQNLTKGSKKPVPATMNPPPLTVFKLSKRLSRSVRETIFPSSRLGADSSLHNSPWKIFTHREILLATSSFSQENLIGKGGYAEVYKGCLPNGQLVAIKKLTRGTQDEIIGDFLSELGIMAHVNHPNTAKLVGYSVEGGMHIVLEFSEKGSLASVLHGSKENLPWCIRYSIALGTAKGILYLHEGCQRRIIHRDIKAANILLTENYEPQICDYGLAKWLPENWTHHTVSKFEGTFGYLAPEYLLHGIVDEKTDVFAFGVLLLELVTGRRALDYSQQSLVLWAKPLLKKNRIRELIDPSLGDAFDTRQMNLVVLVASLCIHQSSIRRPSMRQIVQLLNGNLSSFKSMKKSRLPFFRKLFQEELLDSE 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1373 490 ProSiteProfiles Protein kinase domain profile. 195 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g1373 490 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 272 474 - -
Lele08g1373 490 ProSitePatterns Protein kinases ATP-binding region signature. 201 224 IPR017441 GO:0005524
Lele08g1373 490 Gene3D Transferase(Phosphotransferase) domain 1 272 477 - -
Lele08g1373 490 MobiDBLite consensus disorder prediction 93 116 - -
Lele08g1373 490 Pfam Protein kinase domain 196 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g1373 490 ProSitePatterns Serine/Threonine protein kinases active-site signature. 314 326 IPR008271 GO:0004672|GO:0006468
Lele08g1373 490 PANTHER OS08G0249100 PROTEIN 79 486 - -
Lele08g1373 490 MobiDBLite consensus disorder prediction 93 107 - -
Lele08g1373 490 MobiDBLite consensus disorder prediction 20 46 - -
Lele08g1373 490 SMART serkin_6 195 467 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g1373 490 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK2 166 269 - -
Lele08g1373 490 Gene3D Phosphorylase Kinase; domain 1 160 270 - -
Lele08g1373 490 SUPERFAMILY Protein kinase-like (PK-like) 180 478 IPR011009 -
Lele08g1373 490 MobiDBLite consensus disorder prediction 23 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1373 Lele-ChrLele08 8797247 8800084 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1373 182 456 Trihelix Transcription Factor Family AT1G68690 40.909 3.93e-67 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lele08g1373 Pkinase 6.8e-42 CL0016