Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1372 ATGTCCCTCTCCCTCTTCTTCTTCCTCTTTGTTTCCCTCGCTTTCCCACTTTCTTCCCTCTCTGCAAACGACACCGCTCTTAATGCTCCCTGCCCTCTCAACTTCACCGTCCTCAATGTTGTTGCCGGCGGTGACAAACCCTCTGTTGACTCCGGCACTGTCTGCGGGTTCTCCCGTTCCGCCATTCGTCTCGTTCAGTCCGATTACCTCCGTCGCACTGGCTTTTTCCTTCCTCCTATCAACTCATCCGAGACCTGCTGGGATAATTTCCAGAAGTTCATCAATCAATACCTTCCCAACATCGACGTTCGCACCACTTGTGGCTTCCAAACAACCTGGATCTCCCAGGGATGCCAGAACATCACCACTAAAGATGATTTCGAGTCCCAGGTTCCTCACTCGGTTATTCAGGGTGTCGGTCGGAATTGCAATCAGTCGCTCGAAAATAACTCCCCCTGCGCCCTCTGTACCTCGAGCTTACCGAATATGCAAGCGTACGTGAAAGGGAATTCGACCGGGAACGTCTCCGATTGTACGGCCTATCCCCCAATTTACGCCGCCGCCTTTTCCAATCAGGCTGGGCCCGCCGACAGAGGCACTGCCCAGTGCGTGTTCCTTCTCAGCTTCAAGTCGCCAGGTTCCAACGGTAATAAACGAACGATTGTTATTGTGGCGGTTGTGATTGTCTGTGTATTGGCTTTGTTGCTGGTGATGGTCGGGCTTTGGCTTCATCGGAGATCGAAACAGAAAGGCAGGAAGGGTATTAGCAAAACTGAGATTCATGTCGTGTCTGGGTTGGATTCAATGAAGGAGAGCACCACTTTGATTAGGTTTACATTCGATGATATCAAGAAGGCAACGAGGAACTTCTCTAGGGATAACATAATAGGTAGAGGGGGATATGGAAATGTGTATAAAGGGTTACTCCCAGATGGAACTGAAGTTGCATTTAAAAGGTTCAAGAATTGTTCTGCTTCAGGAGATGCAAGTTTCACTCATGAAGTTGAGGTCATTGCGAGCGTCAGGCATGTACATTTAGTTGCTCTGAGAGGTTATTGTACAGCCACAACTAATTTAGAGGGTCACCAGAGGATAATCGTTTGTGATTTGGTCAAGAATGGGAGTCTTCATGATCATTTATTTGATTCTTTAGGAAAGAAACTCAGCTGGCCAATTCGTCAACAGATTGCACTGGGCACTGCAAGAGGATTGGCTTATTTACACTATGGGGCTCAACCTTCCATTATCCATAGGGATATTAAAGCAAGTAATATTCTTCTGGATGAGAAGTTTGAAGCTAAAGTTGCAGATTTCGGACTCGCCAAGTTTAACCCCGAGGGAATGACTCATATGAGCACGCGTGTAGCTGGAACAATGGGATATGTTGCACCAGAGTATGCATTATATGGACAGTTAACAGAGAGAAGTGATGTGTTCAGTTATGGTGTCGTGCTTCTCGAGCTTTTGAGCGGGAAGAAGGCTCTTCAAATGAACGACGATGGCCAACCCTCATCTTTGAGTGACTTGGCCTGGTCATTGGTTAGGTCAGGTAGAGCTTTGGATGTCATTGAAGATGGTATGCCGGAAGCCGGTTCGCCAGAAGTGCTCGAGAAGTACGTGTTGATAGCTGTTCTTTGTTCTCACCCTCAGTTGTATGCAAGGCCAACAATGGATCAGGTGGTGAAGATGTTGGAGACTGAGCAATCAGTACCATCAATACCAGAACGGCCAATTCCTCTAGTCGCCGGAAGGATTGATATTGAGAGATCTGCCGGTAGCTTTGGCGGCTCCGGTCAGCTCTCTAGTCCAACAGGTTATCGAACATTCGCATATGAAAGTGAATGCCATTCTTCTAATTCAAAGGAAGAAGAAGGAAGTTCAGACTCAAGAACACTGAGTACATAA 1905 0.4735 MSLSLFFFLFVSLAFPLSSLSANDTALNAPCPLNFTVLNVVAGGDKPSVDSGTVCGFSRSAIRLVQSDYLRRTGFFLPPINSSETCWDNFQKFINQYLPNIDVRTTCGFQTTWISQGCQNITTKDDFESQVPHSVIQGVGRNCNQSLENNSPCALCTSSLPNMQAYVKGNSTGNVSDCTAYPPIYAAAFSNQAGPADRGTAQCVFLLSFKSPGSNGNKRTIVIVAVVIVCVLALLLVMVGLWLHRRSKQKGRKGISKTEIHVVSGLDSMKESTTLIRFTFDDIKKATRNFSRDNIIGRGGYGNVYKGLLPDGTEVAFKRFKNCSASGDASFTHEVEVIASVRHVHLVALRGYCTATTNLEGHQRIIVCDLVKNGSLHDHLFDSLGKKLSWPIRQQIALGTARGLAYLHYGAQPSIIHRDIKASNILLDEKFEAKVADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTERSDVFSYGVVLLELLSGKKALQMNDDGQPSSLSDLAWSLVRSGRALDVIEDGMPEAGSPEVLEKYVLIAVLCSHPQLYARPTMDQVVKMLETEQSVPSIPERPIPLVAGRIDIERSAGSFGGSGQLSSPTGYRTFAYESECHSSNSKEEEGSSDSRTLST 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1372 634 MobiDBLite consensus disorder prediction 612 634 - -
Lele08g1372 634 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 371 572 - -
Lele08g1372 634 ProSitePatterns Serine/Threonine protein kinases active-site signature. 415 427 IPR008271 GO:0004672|GO:0006468
Lele08g1372 634 Pfam SPARK 28 178 IPR043891 -
Lele08g1372 634 SMART serkin_6 290 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g1372 634 Gene3D Transferase(Phosphotransferase) domain 1 371 573 - -
Lele08g1372 634 ProSitePatterns Protein kinases ATP-binding region signature. 296 318 IPR017441 GO:0005524
Lele08g1372 634 Gene3D Phosphorylase Kinase; domain 1 252 369 - -
Lele08g1372 634 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 251 369 - -
Lele08g1372 634 ProSiteProfiles Protein kinase domain profile. 290 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g1372 634 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 148 632 - -
Lele08g1372 634 SUPERFAMILY Protein kinase-like (PK-like) 267 565 IPR011009 -
Lele08g1372 634 Pfam Protein kinase domain 291 502 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g1372 634 CDD STKc_IRAK 296 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1372 Lele-ChrLele08 8789040 8790944 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1372 3 620 Receptor kinase-like Gene Family AT2G48010 62.641 0.0 789
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Lele08g1372 Pkinase 2.2e-41 CL0016