Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1362 ATGGACACTCAAGCAGACCATATTGAAACGCCAACGCCAGCCAAAAGGCACAAGTGCTCAGCATGCTATAAGCAATATAAGAAAAAGGAACATCTCATTGAGCACATGAAAATCTCAAACCACTCAGTCCATCAGCCTAAATGCGGGGTCTGTCAAAAGCACTGCAAATCTTTTGAATCTCTGAGGGAACACCTTACTGGTCCATTGCCGAAAGGAAATTGTTCCAAGCACTTCTCTCAACATGGTTGTCAACTTTGCTTAAAATTATTTGATAGCCCCACATCTCTTATCGATCATAAAGCGATATGTTATCTATCTGCACCCTCTCCTTTGGGAACAGAGACATTGACCTATGTGAGATCCCCAATGCATCGTCCAGATTCTCCTGTTGAAAACCACACTGGAAGGAAATTTGGGGCAATTGCAATTGATTGTGAAATGGTTGGTGGTGGGAGTGATGGAACATTAGATCTTTGTGCTAGAGTGTGCATGGTTGATGAAGATGAGAATTTAATTTTCCACACCTATGTGCAGCCTCAAATCCCAGTTACTAACTATAGATATGATATTACTGGATTGACAGAAGAGCATCTTAGAGATGCCATAACACTTAAGGAAGTTCAAGAGAAGGTATTGCAAATTCTGTACAATGGAGAATCAATTGGCAAAGTTAGATTGGATGGAGGAAAGGCCAATCTTCTTGTGGGGCATGACCTAGAACATGATTTGGACTGCCTGAAATTGAATTATCCTGATCATATGTTGAGGGACACGGCAAAGTATCGTCCGTTGATGAAAACAAACTTGGTCAGCCATTCCCTTAACTATGACATCCAGACAGGCACACATGACCCTTCTGAAGACTGTGTTTCCGTGATGAGGCTGTACAAGAGAATTCGAGGCCAAATTCATACGGAGGAAAACGTCGGAACATTTACAGCAAGTAACGTCACCGGAATTTCTGATTATTGGAAATCCAAGGAAGCTGAGAACTCAACACCGGATGAACTCTTTGCCATGTCAAAGTCAGACTATAAGTGCTGGTGTTTGGATTCAGTGTAG 1062 0.4209 MDTQADHIETPTPAKRHKCSACYKQYKKKEHLIEHMKISNHSVHQPKCGVCQKHCKSFESLREHLTGPLPKGNCSKHFSQHGCQLCLKLFDSPTSLIDHKAICYLSAPSPLGTETLTYVRSPMHRPDSPVENHTGRKFGAIAIDCEMVGGGSDGTLDLCARVCMVDEDENLIFHTYVQPQIPVTNYRYDITGLTEEHLRDAITLKEVQEKVLQILYNGESIGKVRLDGGKANLLVGHDLEHDLDCLKLNYPDHMLRDTAKYRPLMKTNLVSHSLNYDIQTGTHDPSEDCVSVMRLYKRIRGQIHTEENVGTFTASNVTGISDYWKSKEAENSTPDELFAMSKSDYKCWCLDSV 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1362 353 ProSiteProfiles Zinc finger C2H2 type domain profile. 17 46 IPR013087 -
Lele08g1362 353 SMART exoiiiendus 139 305 IPR013520 -
Lele08g1362 353 ProSitePatterns Zinc finger C2H2 type domain signature. 19 41 IPR013087 -
Lele08g1362 353 SUPERFAMILY Ribonuclease H-like 141 300 IPR012337 -
Lele08g1362 353 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 20 311 - -
Lele08g1362 353 Pfam Exonuclease 141 294 IPR013520 -
Lele08g1362 353 CDD REX4_like 141 297 IPR037431 GO:0006364|GO:0008408
Lele08g1362 353 Gene3D Classic Zinc Finger 1 67 - -
Lele08g1362 353 Gene3D - 137 313 IPR036397 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1362 Lele-ChrLele08 8732853 8736030 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1362 16 353 C2H2 Transcription Factor Family AT3G27970 50.578 7.87e-126 363