Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1330 ATGACAACGATCCGCAGGTTTTGCTGTAACGATCTCCTCCGCTTTGCTTCCGTCAATCTCGACCACCTCACTGAAACTTTTAACATGTCATTCTACATGACCTACCTTGCAAGATGGCCGGACTATTTCCATGTTGCCGAAGGTCCTGGCAACCAAATCATGGGTTACATTATGGGGAAAGTGGAGGGGCAAGGAGAGTCCTGGCATGGTCATGTTACTGCAGTAACTGTTGCTCCAGAATATCGTCGGCAGCAGTTAGCCAAGAAACTGATGAATCTACTGGAAGACATAAGTGATAAGATTGACAAGGCTTACTTTGTGGATCTCTTTGTGAGAGCATCAAATGCACCTGCCATAAAGATGTATGAAAAGCTTGGCTATGTGATATATCGGCGAGTGCTACGCTACTATTCTGGGGAAGAAGATGGATTAGATATGAGGAAGGCATTATCGCGTGATACTGAAAAGAAGTCTATCATCCCTCTTAAACGTCCGATTACTCCTGATGAATTAGAATCCTGCGAGGAAAAAATTGATGAAATCCAATTCGAGGGATTGATCCTGGGACCAGTGAAAGAAAGAAGCCAGGTGAAAAGTGATCCTAGAAGACCCTTCGGACTGAATGACTCACTTGCACCTTTCATTGAATTTCACTTCACATCTGTTTACATGAAAAGGTTTCCCATCCCCCAAAAGCATCGCAAGAAACATGTTAGAAGTCTGAGATGTCTTGTGTTGAGGAATGCGAAGGGGAAGGAAGGGTGGTTCTCATCGTTTCAGCTGCAGCCTCTCTTCTCTCATCATGATACCAAGCATATGACTCTCTCTCACTCACTGGATGCCGTGTCTCCTGTGACTGATTCTGAGGGCAGTGGGATTTCACGTTGA 888 0.4493 MTTIRRFCCNDLLRFASVNLDHLTETFNMSFYMTYLARWPDYFHVAEGPGNQIMGYIMGKVEGQGESWHGHVTAVTVAPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNAPAIKMYEKLGYVIYRRVLRYYSGEEDGLDMRKALSRDTEKKSIIPLKRPITPDELESCEEKIDEIQFEGLILGPVKERSQVKSDPRRPFGLNDSLAPFIEFHFTSVYMKRFPIPQKHRKKHVRSLRCLVLRNAKGKEGWFSSFQLQPLFSHHDTKHMTLSHSLDAVSPVTDSEGSGISR 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1330 295 Gene3D - 2 180 - -
Lele08g1330 295 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1 150 IPR016181 -
Lele08g1330 295 FunFam N-alpha-acetyltransferase 20 2 161 - -
Lele08g1330 295 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 2 151 IPR000182 GO:0016747
Lele08g1330 295 PANTHER N-ALPHA-ACETYLTRANSFERASE 20 1 171 - -
Lele08g1330 295 CDD NAT_SF 45 97 - -
Lele08g1330 295 Pfam Acetyltransferase (GNAT) family 39 127 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1330 Lele-ChrLele08 8480352 8486014 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lele08g1330 Acetyltransf_1 5.1e-14 CL0257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g1330 08 8480352 8486014 Lele08g1330 08 8480352 8486014 ECH
Lele05g1479 05 9469046 9472012 Lele08g1330 08 8480352 8486014 hybridization
Lele06g1335 06 8539838 8544578 Lele08g1330 08 8480352 8486014 hybridization