Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1324 ATGTATGCTTGGGTTGCATTGGAAGCTCCTCCAAAAACTAGTCCTTCCTACTGTTACTGTGACTTCTCTTTCTCACCCTCCATAACTTCCCCACGCCACGCTTCGCCACGGGATCGTCTTTTGCGTCTCTCATCGTATGTGATCGTAGAATTTCCCGACTTGCCTACATTAAGTTTAATGGACGTCTTACGGGCGTGGCTTTCAGCGTGCGTCAACGGAAAGTCAATGATTGGGACGAGGGATTTGGAGTTAGGGTTTTAGGCATTAAACTTGACAATTCAGGACAATCAGGTAGAGCCTGTTGTACAACAAGAAAGGGTCTTTGATTGGGATACGAATAACAATGAAAATATCATGTTAGCCGAAAATGGGAGCAAGATGAGTAGTTTAAGCTGTGATGATAACGTTGAAGGAGTTGACATTGTGATGGAGGTGAAGAGAGAAGATGATTTGAACGATCAGGTGAAGGTTGGTGGTCGACTATTGTCCTCAGTGTCCGAGGGAGCTGGCAACAAGATATCTGATGATCGAGAGGCATTAAACTTGAAAGTTGATAATAAGGATGCGGAGCCAACTGTGCAACAAGAACGTGACTTAGATTGGGATATGGGTAAGGGTGGAAATGTGGGGTTTGTTGATGACAGGAGCAAAATGAGTAGTTTAAGCTGTGATGATAACATTGAAGGGTTTGACATTGAGGTGGAGGTGATGAAGAAAGACTATTTAAATGATAAAGTGCAGATTGGTGGTCGAGTATTGCGCTCAGCGTCAAAGAGAGCGGTCAGTAAAGTATCTGATGGAGAAACAACTGAGAATGAGGAAGTGAAGCCAATCAACCAACAACCATGTGACTTAGATTGGGAGGTGGGCAAGAGTGGAAATGTTGGATTGGGTAAGACTAAGATCAAAAGGAATACTTTACGGTCTGATCATTGCTTTGACGGACTTGATATTGAGATGGAGTTGAAGAAGAAAAGTAATACAAATGATAAAGTGAAGACTAGCGGTCGAGTATTGCGCTCAATGTCAAAGAGAGTAGACAGTAGGATATTTCATGGTGGAGAAGCTGATGAGGTGTTGGTTGTGAAAAATGGAGAGAATGAACATGTTTGGTTTGAGAAAAATAAGGCTAAGGTGGAAAAGGAAGAAGGGGATGATTTTGTTGGTGGGAAAATGGGTGGCAATGAAAGAAGGAAGTTGAAACGAAAGCGTGGCAGGCCCCCTAAATTGAAGATGGAAGAGCAAGATCAAGCAGTTGGTAATAGGCAACAGAAATGTGGCAGTCCTCCCAAATTGAAGATAGAAGAGCAAGATCAAGTTGTTGGTAAAATGCAACGGAAGCGTGGAAGGCCCCCCAAAGTGAAGATGGAAGAGCAAGATCAACTAGTTGGTGATATGCAACAGAAGCGTGGAAGGCCCTTCAAAGTGAAGATGGAAGTGCGAGATCAACTAGCTGGTAAAATGCAACGTAAGCGTGGAAGGCCCTTCAAAGTGAAGATGGAAGTGCGAGATCAACTAGCTGGTAAAATGCAACGTAAGCGTGGAAGGCCCTTCAAAGTGAAGATGGAAGTGCGAGATCAACTAGGTGGTAATATGCAACGTAAGCGTGGAAGGCCCTTCAAAGTGAAGATGGAAGTGCGAGATCAACTATCTGGTAATATGCAACGTAAGCGTGGAAGGCCCTTCAAAGTGAAGATGGAAGAGCAAGATCAACTAGTTGGTAATATGCAACGTAAGCGTGGAAGGCCCCCCAAAATGAAGATGGAAGAGCAAGATCAACCAGTTGGTAATATGCAATGTAAGCGTGGAAGGCCCCGCAAAATGAAGATGGAAGAGCAAGATCAACTTCCTGGCAAAAAAATGCCATGGAACTGTGGAAAGCCTCCCAAAAGTGGGCAGAAAATTAATCAACTGGAAATAGCACGAAACAGAAAAAGAAGGGTGGGCTTTCAGAAAGTTAAGAAAAGTATAACTGTGAGAGACAATACAAATACAAATGCAGTTGATAATATGTGCTTGAAAAAGGGATCTTGTGTAACAGAATCAAAAAAGAAGAGATTTTCTCCGGTTAAGAAGAATGAATTTGGGAGCTTTTCAGAAACCGAGAATAGTGCATTGACTATGCCATTAATATCAAATTCTGCAAATCCTCTCATTAAGAAGAAGAAAGGAATGAGAAAAGCGAAGCAGTTGGCGAGGCAACACATTTGGGAGCTACTTTCGGCTGCAGGTTGGATTGTTGATTACAGACCTAGGAATGGCAAAGAGTTTAATGATGCAGTGTATGTTAGTCCAGATGGAAAGACTCACTGGTCAATTACCTTGGCTTACAAAAGGCTTCGGATGCATTCTGAAGCTGGTGATGGTGAAGGTGACGTATACATTCCAGGTTTCAAATTTGTGCCCATACCATTGGAGGAATTCAATATTCTAACTAGGGTCATTAGAAAGAGAAGGAAAGATAAAGGTAAATTGAAGCAAACGGGAGGAAAAGATGGAGATTCAATTAATGGAATCAAAAGAAAAATGAAGGGGAAAGTGAAGAGAAAAATGTCACTTGTTGAGGAGGACAATTTAGACAATACATCACATAAAAGGTTTCCAGTTCTGGTTAAGGATCGGAAACGGCAGAAAACACACAATAAGAAGCAAAGTGTTTTTATGGTTCGCAATGCTGAGGAGATGGACTCGAAAACTAATGGGTATGTACTTTACACTGGAAAGCGAACTGTGCTTGCCTGGATGATTGATTTGGGAACAATCATGCAAAATGAGAGGGTTCACCATTGGAATCACGGAAGGAAAGGCGCAAAACTGGAGGGTAGGATCACAAGAGATGGAATTCATTGTGACTGCTGCAATGAAATTGTAACAATGTCAGAATTTGAAGCCCATGCAGGAAGCAGACTCTCTGATCCACTAAAAAATATACTTATAGAGAGAGGAATTTCCCTTCTGCAATGCCTGCTAGACTCATGGAATAAACAAGATGAACATGAAAGAAAAGGCTTCCATTTTATTGACACTACAAGTGAAGACCCCAATGATGAAGCATGCGGTGTCTGTGGTGATGGTGGAGACTTGATCTGTTGTGATAATTGCCCATCAACATTCCATCAAAGCTGCCTAAATATCAAAGAGTTCCCACCTGGCAACTGGCGATGCATTTATTGTTGTTGCAAATTTTGTGAGTTGGTTGATGGAAGTACAAATGAAAGAGATGGCTATGATGACTTTACTACCTCTGCTTTACTTACGTGCCGATTATGCAATCAAAAATATCATAGATCTTGTGTTGAGGTAAATGGAGTCCAAGCTGATGACTCTAGTTTCTCATTCTATTGTGGAAACAGATGTGAGGAGTTATCCAAGAGACTAGAAATGCTTCTCGGGGTTAAACATGACATTGAAGATGGACTTTCTTGGACTTTCATTCGCCGGTCAGATGTTGGCTATGATGCTTCTCAGATAGAATCTCAGATGGTTGAATGCAATTCCAAGCTAGCTATCGCATTATCTGTAATGGATGAGTGCTTCATGCCATATATTGATCATAGAAGTGGGATTAATCTCATCCACAGTATTCTTTATAATTGTGGTTCAAACTTCAATCGCCTGAACTATACTGGCTTTATTACTGCTATACTGGAGAGAGGTGATGAGCTCATTGGCGCAGCATCTATTAGGATTAGAGGGAACCAACTAGCAGAAATGCCATTCATTGGGACCCGCTATATGTATAGGCGCCAAGGAATGTGCCGCCGGCTTCTGAGTGCTATTGAATTGGCGCTTAGCTCTTTAAATGTTGAGTTATTGGTCATACCAGCAGTCTCAGAAGTCAGAGATACTTGGACTTCTGTTTTTGGGTTTGAGCCGCTTGAAGTGACAAGGAAGCAAATGATAAAGAATTTCAATCTGCTGGTATTCCCTCATGTAGATATGTTAATGAAAGAGATAAAGAAGCCTGAAGTTGCTGATGAAGATCTGATTCCTATAGAAGTTTCAAATCCTAAACTTCAGAGGCATCTAAGTACACTTGAGGAAGCAACTGACGGTGATGAACCAAGTTCATTTCGGTCTGATTTGATCATTTCTGATGGGAGTGGGATACCTGCGTTAGATATATGCCCAGTGAATGATAGATACGTGTCTGTTGAATCTGGTTCTCCTGATGCCATATTGAATAACCCACATGACAGTACTAGCAAGACTGTACATCCTGATACAAGTCCAAAAGATGCAAAATGTGAATTTGGATTCCATGCTGTCAATGATAATTTGACAGTGGAAGGCATGACTGATGTAAAGGCACATGATTATGTTAGCGCTGCTCATTTGCAAGCTGAAGAGATGATCAATCATGATTGTGTTCAATCGAGAGAAATAGATTCTAAATCTATCAAGGGCTGCGGTTCTCAGCGGAGACCCAGTGGTTATTATGCCCAAGATGAAGTGAATCTCGGGACCACTAAAGCTGATAAATCAGACGTGCGTGTTGCAGAAGCAACCAATCTCCATAGTCTCGTACATCCTGGAGATTCCCAATCAGTACAGATTGCTTCAGGTTCCTGCGAGGATATCACAAACGGTGTAAATGAGAGGAATGAAGCAGCCATTACGGCTGATGGGAACTCAGATGTTAGTGATAAGCCTGGTATAAATCGGTCTTCAGAGCCGCCTGAGCCTGATTTACAGGTCAATCAAACTGGACAGGGTGACGCTCCATCCTCGTGTGGTTCCGGCATGGCTCTTCACTGTGCATCAGCCGAAGTTATAGTTCTGTCCAACGAAGCCAGTTGA 4800 0.4219 MYAWVALEAPPKTSPSYCYCDFSFSPSITSPRHASPRDRLLRLSSYVIVEFPDLPTLSLMDVLRAWLSACVNGKSMIGTRDLELGFXALNLTIQDNQVEPVVQQERVFDWDTNNNENIMLAENGSKMSSLSCDDNVEGVDIVMEVKREDDLNDQVKVGGRLLSSVSEGAGNKISDDREALNLKVDNKDAEPTVQQERDLDWDMGKGGNVGFVDDRSKMSSLSCDDNIEGFDIEVEVMKKDYLNDKVQIGGRVLRSASKRAVSKVSDGETTENEEVKPINQQPCDLDWEVGKSGNVGLGKTKIKRNTLRSDHCFDGLDIEMELKKKSNTNDKVKTSGRVLRSMSKRVDSRIFHGGEADEVLVVKNGENEHVWFEKNKAKVEKEEGDDFVGGKMGGNERRKLKRKRGRPPKLKMEEQDQAVGNRQQKCGSPPKLKIEEQDQVVGKMQRKRGRPPKVKMEEQDQLVGDMQQKRGRPFKVKMEVRDQLAGKMQRKRGRPFKVKMEVRDQLAGKMQRKRGRPFKVKMEVRDQLGGNMQRKRGRPFKVKMEVRDQLSGNMQRKRGRPFKVKMEEQDQLVGNMQRKRGRPPKMKMEEQDQPVGNMQCKRGRPRKMKMEEQDQLPGKKMPWNCGKPPKSGQKINQLEIARNRKRRVGFQKVKKSITVRDNTNTNAVDNMCLKKGSCVTESKKKRFSPVKKNEFGSFSETENSALTMPLISNSANPLIKKKKGMRKAKQLARQHIWELLSAAGWIVDYRPRNGKEFNDAVYVSPDGKTHWSITLAYKRLRMHSEAGDGEGDVYIPGFKFVPIPLEEFNILTRVIRKRRKDKGKLKQTGGKDGDSINGIKRKMKGKVKRKMSLVEEDNLDNTSHKRFPVLVKDRKRQKTHNKKQSVFMVRNAEEMDSKTNGYVLYTGKRTVLAWMIDLGTIMQNERVHHWNHGRKGAKLEGRITRDGIHCDCCNEIVTMSEFEAHAGSRLSDPLKNILIERGISLLQCLLDSWNKQDEHERKGFHFIDTTSEDPNDEACGVCGDGGDLICCDNCPSTFHQSCLNIKEFPPGNWRCIYCCCKFCELVDGSTNERDGYDDFTTSALLTCRLCNQKYHRSCVEVNGVQADDSSFSFYCGNRCEELSKRLEMLLGVKHDIEDGLSWTFIRRSDVGYDASQIESQMVECNSKLAIALSVMDECFMPYIDHRSGINLIHSILYNCGSNFNRLNYTGFITAILERGDELIGAASIRIRGNQLAEMPFIGTRYMYRRQGMCRRLLSAIELALSSLNVELLVIPAVSEVRDTWTSVFGFEPLEVTRKQMIKNFNLLVFPHVDMLMKEIKKPEVADEDLIPIEVSNPKLQRHLSTLEEATDGDEPSSFRSDLIISDGSGIPALDICPVNDRYVSVESGSPDAILNNPHDSTSKTVHPDTSPKDAKCEFGFHAVNDNLTVEGMTDVKAHDYVSAAHLQAEEMINHDCVQSREIDSKSIKGCGSQRRPSGYYAQDEVNLGTTKADKSDVRVAEATNLHSLVHPGDSQSVQIASGSCEDITNGVNERNEAAITADGNSDVSDKPGINRSSEPPEPDLQVNQTGQGDAPSSCGSGMALHCASAEVIVLSNEAS 1599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1324 1599 MobiDBLite consensus disorder prediction 1560 1576 - -
Lele08g1324 1599 MobiDBLite consensus disorder prediction 545 575 - -
Lele08g1324 1599 MobiDBLite consensus disorder prediction 385 435 - -
Lele08g1324 1599 Pfam Tify domain binding domain 941 990 IPR032308 -
Lele08g1324 1599 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1210 1303 IPR016181 -
Lele08g1324 1599 SUPERFAMILY FYVE/PHD zinc finger 1010 1064 IPR011011 -
Lele08g1324 1599 SMART PHD_3 1018 1059 IPR001965 -
Lele08g1324 1599 SMART PHD_3 1060 1120 IPR001965 -
Lele08g1324 1599 CDD NAT_SF 1215 1274 - -
Lele08g1324 1599 PRINTS AT-hook-like domain signature 401 411 IPR017956 GO:0003677
Lele08g1324 1599 PRINTS AT-hook-like domain signature 443 454 IPR017956 GO:0003677
Lele08g1324 1599 PRINTS AT-hook-like domain signature 575 585 IPR017956 GO:0003677
Lele08g1324 1599 PANTHER PHD FINGER PROTEIN 12 720 1454 IPR042163 GO:0003714|GO:0045892
Lele08g1324 1599 MobiDBLite consensus disorder prediction 1527 1552 - -
Lele08g1324 1599 ProSiteProfiles Zinc finger PHD-type profile. 1016 1061 IPR019787 -
Lele08g1324 1599 MobiDBLite consensus disorder prediction 1389 1410 - -
Lele08g1324 1599 MobiDBLite consensus disorder prediction 545 633 - -
Lele08g1324 1599 MobiDBLite consensus disorder prediction 1527 1581 - -
Lele08g1324 1599 SMART AT_hook_2 401 413 IPR017956 GO:0003677
Lele08g1324 1599 SMART AT_hook_2 599 611 IPR017956 GO:0003677
Lele08g1324 1599 SMART AT_hook_2 533 545 IPR017956 GO:0003677
Lele08g1324 1599 SMART AT_hook_2 555 567 IPR017956 GO:0003677
Lele08g1324 1599 SMART AT_hook_2 445 457 IPR017956 GO:0003677
Lele08g1324 1599 SMART AT_hook_2 489 501 IPR017956 GO:0003677
Lele08g1324 1599 SMART AT_hook_2 511 523 IPR017956 GO:0003677
Lele08g1324 1599 SMART AT_hook_2 577 589 IPR017956 GO:0003677
Lele08g1324 1599 SMART AT_hook_2 467 479 IPR017956 GO:0003677
Lele08g1324 1599 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1007 1075 IPR013083 -
Lele08g1324 1599 CDD PHD1_AIRE 1019 1058 - -
Lele08g1324 1599 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 1159 1319 IPR000182 GO:0016747
Lele08g1324 1599 MobiDBLite consensus disorder prediction 1389 1404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1324 Lele-ChrLele08 8438538 8448607 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1324 453 1326 PHD Transcription Factor Family AT5G36670 37.045 0.0 579
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g1999 13 27345881 27347497 Lele08g1324 08 8438538 8448607 CCT
Lele14g1931 14 25672658 25673497 Lele08g1324 08 8438538 8448607 CCT
Lele15g0407 15 2337441 2338622 Lele08g1324 08 8438538 8448607 CCT
Lele16g0432 16 2323134 2323862 Lele08g1324 08 8438538 8448607 CCT
Lele08g1324 08 8438538 8448607 Lele08g1324 08 8438538 8448607 ECH
Lele05g1473 05 9435277 9444263 Lele08g1324 08 8438538 8448607 hybridization
Lele06g1329 06 8503420 8514239 Lele08g1324 08 8438538 8448607 hybridization