Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1323 ATGCTCAACACAATAGGAAGAAATCTGAACCACTGCTTCTCCAGGCTTTCGCGGCCATTATTATCACCTGAAGCTTCGTCGTCTTCTTCCGGCAGCATTCGTCAAGACAACCCTATTTCACCCGCCCCCCCGTCTTCTTCTGTGTTCATAACAAACTTCAACTCACTCTATGACCCCACCTCGGATCACTCCTCCATCAACGCCGGCAATGAACCGGACTTGGCCACCGCCTTCGCCTCCCGACGCTTCTTCTTCTCCTCTCCCGGCCGCTCTAACTCCATCGTGGAATCCTCCTCTGCCGCCGTCGTTCAGAAGAAGAAGGTCTTCGACAATAGCGTGGCCGTCCCCACCTTCTCGCCGGACCCCTATTTGGACTTCCGACGATCCATGCAGGAGATGGTGGAGGCGCGTCCGGAGCTCAGGGATGTGAACTCCAACTGGGAAATCTTGCACGAGCTTCTTCTCTGTTATCTTGCTCTCAATCCCAAACACACTCACAAGTATATTGTTGGTGCTTTCGCCGATCTTCTCGTCAACCTCATGCCATCGCCGCCGACGTGGGTGCCGCCTAATCCATAG 579 0.544 MLNTIGRNLNHCFSRLSRPLLSPEASSSSSGSIRQDNPISPAPPSSSVFITNFNSLYDPTSDHSSINAGNEPDLATAFASRRFFFSSPGRSNSIVESSSAAVVQKKKVFDNSVAVPTFSPDPYLDFRRSMQEMVEARPELRDVNSNWEILHELLLCYLALNPKHTHKYIVGAFADLLVNLMPSPPTWVPPNP 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1323 192 MobiDBLite consensus disorder prediction 21 44 - -
Lele08g1323 192 Pfam Transcriptional repressor, ovate 119 180 IPR006458 -
Lele08g1323 192 ProSiteProfiles OVATE domain profile. 115 179 IPR006458 -
Lele08g1323 192 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 113 181 IPR006458 -
Lele08g1323 192 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 47 180 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1323 Lele-ChrLele08 8436142 8436720 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lele08g1323 Ovate 8.2e-25 No_clan