Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1310 ATGGCCGAGAAACTGAGTGGCCCCGTGGAAGACGATGCCATGGAAAAACCTGAATCAAAAGAGAAGAGTCTATGTTCAAAGATGAATGAGAAGAACGCAAGCTTCAACGATCGTGGAATATGTGTGAGAGCCGATAAGATTGATTTCAAGGATTGGGACAGTCAATTGGCCAAGCACTTAAATAAGGTTCTCTCCAGAGAGGTGACGCGGAAGAAGAAGGAAGACTGGGAAATTGATTCCTCTAAATTGGACATAAGGCGTGCTATCGATCACGGTGCCTATGGAACTGTCTACCGCGGCATTTATGACGGCCAAGACGTTGCCGTGAAAGTATTTGATTGGAGGGAAACTGACACTGACGCAGCTGCTATTCGGGCATCATTTCAGCAAGAGGTTGCCGCTTGGCATAAGCTTAACCACCCAAATGTTACAAAGTTTGTCGGAGCTTCCATTGGGAACTCATATGTGAAAATTTCTTCTGAAGACATATCAAGTGAAGTATATTCATTTATTCCAGTCCAGGCCTGTTGTGTTCTTGAGTTTGTTCCTGGGGGGACGCTAAAGAAGCTTCTGATGAGGAACAGACGGAAAAAACTTGATTTTGAGGTTGCGATTCAACTTGCTTTGGACCTCTCCAGAGGTTTGAGTTATCTTCACTCGAAAAAGATCGTGCACCGCGACGTGAAGACAGAAAACATTCTGTTGGATGCAAATGGAACTGCAAAAATTGCTGATTTTGGCGTTGCTCGAATTGAGGCTCAGAACCCATGTGAAATGACTGGAGGGGTTGGCACCCCTTGCTACATGGCGCCAGAGGTGCTTAACGGTAAGCCTTACAATAAGAAATGTGACGTATATAGTTTTGGGATATGCTTCTGGGAGATCTATTGCTGTGACGTGCCTTATCCTACTACTCAGAAGATTACTGATGTATTTACTGGAGTTGTCCGAAAGAATCTGAGACCAGAAATCCCAAGATGTTGCCCGAGTTCACTTGCAAGAATCATGCGAAAATGTTGGGATGAGGACCCAGATAAACGCCCCGAGATGGAGGAAGTAGTGAGAATGTTAGAGGCAATTGATACAAGTAAGGGAGGACGCATGATCTCAAAAGACCAATCTAGTTTTTGGTGTTTTTGTCCCGGGGCAGTTCTATGA 1158 0.4482 MAEKLSGPVEDDAMEKPESKEKSLCSKMNEKNASFNDRGICVRADKIDFKDWDSQLAKHLNKVLSREVTRKKKEDWEIDSSKLDIRRAIDHGAYGTVYRGIYDGQDVAVKVFDWRETDTDAAAIRASFQQEVAAWHKLNHPNVTKFVGASIGNSYVKISSEDISSEVYSFIPVQACCVLEFVPGGTLKKLLMRNRRKKLDFEVAIQLALDLSRGLSYLHSKKIVHRDVKTENILLDANGTAKIADFGVARIEAQNPCEMTGGVGTPCYMAPEVLNGKPYNKKCDVYSFGICFWEIYCCDVPYPTTQKITDVFTGVVRKNLRPEIPRCCPSSLARIMRKCWDEDPDKRPEMEEVVRMLEAIDTSKGGRMISKDQSSFWCFCPGAVL 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1310 385 SUPERFAMILY Protein kinase-like (PK-like) 64 357 IPR011009 -
Lele08g1310 385 ProSitePatterns Serine/Threonine protein kinases active-site signature. 223 235 IPR008271 GO:0004672|GO:0006468
Lele08g1310 385 PRINTS Tyrosine kinase catalytic domain signature 328 350 IPR001245 GO:0004672|GO:0006468
Lele08g1310 385 PRINTS Tyrosine kinase catalytic domain signature 217 235 IPR001245 GO:0004672|GO:0006468
Lele08g1310 385 PRINTS Tyrosine kinase catalytic domain signature 283 305 IPR001245 GO:0004672|GO:0006468
Lele08g1310 385 PRINTS Tyrosine kinase catalytic domain signature 179 192 IPR001245 GO:0004672|GO:0006468
Lele08g1310 385 ProSiteProfiles Protein kinase domain profile. 83 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g1310 385 Gene3D Phosphorylase Kinase; domain 1 71 161 - -
Lele08g1310 385 Pfam Protein tyrosine and serine/threonine kinase 84 357 IPR001245 GO:0004672|GO:0006468
Lele08g1310 385 Gene3D Transferase(Phosphotransferase) domain 1 182 376 - -
Lele08g1310 385 FunFam Kinase suppressor of Ras 1 72 163 - -
Lele08g1310 385 CDD STKc_MAP3K-like 89 357 - -
Lele08g1310 385 MobiDBLite consensus disorder prediction 1 27 - -
Lele08g1310 385 SMART serkin_6 83 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g1310 385 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 62 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1310 Lele-ChrLele08 8376020 8378039 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1310 15 380 MAP Kinase Kinase Kinase AT3G22750 61.662 1.10e-164 464
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lele08g1310 PK_Tyr_Ser-Thr 1.2e-58 CL0016