Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1295 ATGGGGATGACTCTGCGTGCATCTATTGGTTCCATGCATCGATCTGCCAAAGATATCACAATAACTCGAAAGAAACACTACGAAGGATTGGATCATGTGGCTGCTTCATCTGTTGGAATCTGGAAGGCACGTGAAGTCGTTGCTGCCTCCGGCCACACATCCTTTGAGTTAGGTGATATGAGTCAGAAAAAGAACCCTCTTGTGTTTCTAGACGTCTCAACTGATGGGGATCCTGTGGAAAGAATTGTTATTGAGCTTTTTGCCAGTATCGTTCCTAAGACAGCTGAAAATTTTCGGGCACTCTGCACAGGTGAGAAGGGCATTGGAAAATCAACTGGAAAGCCTCTGCATTATAGAGGAACTTGTTTTCATCGTATAATTAAAGGATTCATGGCCCAAGGTGGTGACTTTTCAAGGGGCAATGGCACTGGTGGAGAAAGTATATATGGAGGAAAGTTCGCTGATGAAAATTTCATATTAAAGCATGACGGACCTGGTCTTCTATCTATGGCTAATGGTGGTCCAAACACAAATGGTTCCCAATTCTTTATTACCTTCAAGCGCCAACCACATCTTGATGGGAAACATGTTGTTTTTGGAAAAATTGTTAGTGGATTAGATCTTCTGAAGAAAATTGAAATGGTGGGGACACCAGAAGGGAAACCTGCCCAGCCCGTTAAAATAATTAATTGTGGAGAAACGACTGAAGCGAAAATTCAGCCAAAAATTGTGAAAGAGAAAGGTAAAAAGAGAAAATCTGGGGAATCCTCAATTTCTTATGATAGTTCTGACAAAAAATCAAAAGGAAAAAGGAAAACATCTTCCAAGGATTTGAGGAAGAGGAGGAGATACTCAACGTCTGATTCATACAGCTCTGATAGTGATAGTGACTCTGTTTCTTCTGACTCAGATTCTGGGTCAGAATCATCACTTTCTGATTCAAGTTCCTCTAGCTATGGTAAACATCGGAAGAGGAAACCTGTGAAAAGATCTAGGCACAATCAGGGGAAGAAAAGAAGAAATGGACGAAAGCAAAAGAGTAGCGGGCATAATAGACGATCTAGACGCAAGTCCAAATGGAGCTCAGAAGATTCAAGTGATACTGAAAGTGATAGTACTAAAGGTGGTGACGGTTCCGATGATGAGAAAGCTCACCACCGTGTCTCAGGTCGTAAAACACATGCTGACAACAAACAAAAAAGAAATTTAGAATCAGGAAAGCAATCTCCCAGCCCTCCTTTAGTTGGAACTGCTCCAGATCAAGGGGAAGATTCCAAGGTCAAAAGCACTGAGGACAAGCAATCACATGAAGAAGGTGAATTGTCTCCAGAAAATTCTGAGTTTCTGATTAATGGGCATGATAGTGAAGCCAAATTCAGTAAACCTGCTAAGCAACCCACTCATTTGGATGATTCTAATGACAATAGAGGTGCAAGTCCTAGAAGAAGTGATGCTATGAGTCCCACTAGGAAGTTAGTTGAGAAAAACCAAGGAGGTGCTTTGTTGACGAGTACCCGCCAACTTGCTGCCTCCAAACACAGTCAGGGTTTGTCAAAAAGCCCTTCACCAAATGGTGAACCAAAGCGTATTAGAAAAGGACGTGGCTTCACTGAGCGCTATGCCTTTGCACGCAGATATCGTACTCCATCTCCAGATCGGTCACCCCATTCCTATCGCTATGGTGATAGAAATATAAGAAGGAACTTCGACAGGCGTACAAGCTACAGAAACTACTCTGAGCGTTCACCACAGAGACGCCGCTATGGAAGCCCTCCAATGCGCAGGAGCCGTCCAAGATACCAAAGCAGAAGAAGCCGGAGTAGGAGCATCTCTCACAGTCCAGTGCGTGGCCGTTTTAGGGACCGTGTTCACAGCCAGAGTCCAATACGTAGCCCCTCTCCAGATGACAGGCGACTTCCGATAAGTGATAGATTAAAATCCCGACTTGGCCCTCAAAGTGTTCGGCACTCTCCAGATAGAGGAAGGGCCAGGTCCAATTCCAGGGATCATTTGTCTCCCTCCAGATCCCCTGATGCTACCCCACCTAGGCGTCATGATAAAAGGACTTCTGCATCTCCAAGCAGGTCTAGATCTAGTTCGTCATCCGGACCGAAGGGATTAGTTTCCTATGGAGAGGCCAGTCCTGATTCCGGGCCAAGGTAG 2163 0.4471 MGMTLRASIGSMHRSAKDITITRKKHYEGLDHVAASSVGIWKAREVVAASGHTSFELGDMSQKKNPLVFLDVSTDGDPVERIVIELFASIVPKTAENFRALCTGEKGIGKSTGKPLHYRGTCFHRIIKGFMAQGGDFSRGNGTGGESIYGGKFADENFILKHDGPGLLSMANGGPNTNGSQFFITFKRQPHLDGKHVVFGKIVSGLDLLKKIEMVGTPEGKPAQPVKIINCGETTEAKIQPKIVKEKGKKRKSGESSISYDSSDKKSKGKRKTSSKDLRKRRRYSTSDSYSSDSDSDSVSSDSDSGSESSLSDSSSSSYGKHRKRKPVKRSRHNQGKKRRNGRKQKSSGHNRRSRRKSKWSSEDSSDTESDSTKGGDGSDDEKAHHRVSGRKTHADNKQKRNLESGKQSPSPPLVGTAPDQGEDSKVKSTEDKQSHEEGELSPENSEFLINGHDSEAKFSKPAKQPTHLDDSNDNRGASPRRSDAMSPTRKLVEKNQGGALLTSTRQLAASKHSQGLSKSPSPNGEPKRIRKGRGFTERYAFARRYRTPSPDRSPHSYRYGDRNIRRNFDRRTSYRNYSERSPQRRRYGSPPMRRSRPRYQSRRSRSRSISHSPVRGRFRDRVHSQSPIRSPSPDDRRLPISDRLKSRLGPQSVRHSPDRGRARSNSRDHLSPSRSPDATPPRRHDKRTSASPSRSRSSSSSGPKGLVSYGEASPDSGPR 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1295 720 Gene3D - 57 240 IPR029000 -
Lele08g1295 720 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 118 135 IPR020892 GO:0003755|GO:0006457
Lele08g1295 720 MobiDBLite consensus disorder prediction 289 317 - -
Lele08g1295 720 FunFam Peptidyl-prolyl cis-trans isomerase CYP95 60 241 - -
Lele08g1295 720 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 70 232 IPR002130 GO:0000413|GO:0003755
Lele08g1295 720 MobiDBLite consensus disorder prediction 693 707 - -
Lele08g1295 720 MobiDBLite consensus disorder prediction 498 522 - -
Lele08g1295 720 MobiDBLite consensus disorder prediction 321 356 - -
Lele08g1295 720 MobiDBLite consensus disorder prediction 240 271 - -
Lele08g1295 720 MobiDBLite consensus disorder prediction 636 671 - -
Lele08g1295 720 MobiDBLite consensus disorder prediction 588 613 - -
Lele08g1295 720 CDD cyclophilin_ABH_like 66 232 - -
Lele08g1295 720 SUPERFAMILY Cyclophilin-like 63 234 IPR029000 -
Lele08g1295 720 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 68 233 - -
Lele08g1295 720 MobiDBLite consensus disorder prediction 525 583 - -
Lele08g1295 720 MobiDBLite consensus disorder prediction 240 720 - -
Lele08g1295 720 MobiDBLite consensus disorder prediction 424 443 - -
Lele08g1295 720 MobiDBLite consensus disorder prediction 457 478 - -
Lele08g1295 720 MobiDBLite consensus disorder prediction 357 403 - -
Lele08g1295 720 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 69 233 IPR002130 GO:0000413|GO:0003755
Lele08g1295 720 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 86 101 IPR002130 GO:0000413|GO:0003755
Lele08g1295 720 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 123 135 IPR002130 GO:0000413|GO:0003755
Lele08g1295 720 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 194 209 IPR002130 GO:0000413|GO:0003755
Lele08g1295 720 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 181 193 IPR002130 GO:0000413|GO:0003755
Lele08g1295 720 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 166 181 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1295 Lele-ChrLele08 8237133 8246935 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1295 84 229 U-box Gene Family AT5G67530 48.649 7.24e-32 129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g1295 08 8237133 8246935 Lele08g1295 08 8237133 8246935 ECH
Lele05g1437 05 9151374 9161085 Lele08g1295 08 8237133 8246935 hybridization
Lele06g1298 06 8273279 8282363 Lele08g1295 08 8237133 8246935 hybridization