Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1274 ATGACAAAGGCAGATACACAGATTAAGAGCCTATCTTCCCACACGGCAATTCCAAAGCTAGTCAATTACAATCCACAACTCTCTCAGCTCACCCGGCGACCCCATTTTTCTGTTTCTGTGGTTCAAGGATCTGTGGTAGACCTTCAACCTACTTTAAAGAAGAAAACTGCGGTTTCAAGAAGCTGGATTCTGCTGGACCGCAATGGCAACGGTACTGTGTTGGAAGCCGACAAGTACACCATTATGCGCCTGGTTGAAATTCACGCAAGAGATCTTCGAATTCTTGATCCGCTGTTATCGTACCCCTCAACCATTTTGGGTAGAGAGAAAATCATTGTCCTCAATTTAGAGCATATTAAAGCTATTATCACTTCAGAGGAGGTGTTACTCAGAGATCCGCTGGATGATGATGTAATTCCTATTGTTGAGCAACTTCAAAGAAGGTTGCCCATAGTGTCTGGTACAGGGCAAGGCCAAGGAGAAGAAGAAGAGACATCTGCTCAAGAAGTTGAAGGCGACGAAGAAAATGAATTTCCGTTTGAGTTCCGTGCCTTAGAGGTTGCATTAGAGGCAATTTGTAGTTTTCTTGATGCGCGGACGAGAGAATTAGAGAACGCTGCTTATCCAGCTTTAGATGACCTCACCTCTAAGATTAGCAGTCGTAACTTGGATAGAGTACGCAAACTGAAAAGTGCAATGACCAGGTTGACAAATAGAGTTCAAAAGATAAGAGATGAACTAGAAAATCTTTTGGACGATGATGATGATATGACCGACCTTTACTTATCGAGAAAGATGGCTGCCTCGTGTTCCCCTACTAGCAGCTGTGATGCTCCTAATTGGATTCTGAGCTCTCCAACTATAGGCTCAAGGGTTCGTAGATCGAGCAGAGCAAGTGCAACAACATTTCAAGGGGAGAATGATGTCGAGGAGCTTGAAATGTTACTCGAGGCTTATTTCATGCAAATTGATGGCACATTAAATAAACTGACCACACTGCGAGAATATATTGATGACACGGAAGATTACATCAACATACAGCTTGACAATCATCGAAACCAACTGATTCAGCTAGAGCTCTTCCTCAGTTCTGGGACTGTGTGCCTGTCCATATATTCCTTGGTGGGAGCAATATTTGGCATGAACATCCCGTACACCTGGAAAGAAGGACACAGTTATATGTTCAAATGGGTGGTAATCTATACGGGAATAGTCTGTGGATCCTTGTTTTTATCCATAGTATCATATGCCCGACGCAAAGTTATTGTTTTGCATTATTGTCTTCTACGGCATTCAGTAAATCAGTATGACGGTGGCGGTTTTCCTGATACTGAGGCAGATGCTAGTGAACTGACGTATGAGGACTACAATAATACGCAGCTACTAAAAGTTAATGCCGATGATTACAACGAAATGGACGTAAATTTCTCTCGCGTGAGCTTAGTCATAGCATGCACTGAGTGGATACTTTGCAGGAAGTGCATATATGACAAAATTACTGATGAGGAATTGGAATGCTGTCCAATATGCAATATTGATTTGGGCTGTACTCCGCTTGAGAAATTGAGGCCAGACCACAGTTTGCAAGATGTAAGGGCTAAAATTTTCCCTTTGAAGCAATCAAAGGAAAAGGCACCAGAAGTTGTCCCCCCAGAACCATTACCAGCTAGAAGAAAGGAAAGATCACTTTCATCTTTGGTTGTCAGCACTCCCAGAGTATCAACACAGACAACCATGACAGGCAGAAGAACAAAGCCTACAAGAAAGGCTAGTGCTCGCTCCACTAGTTTTTCCATTGAAAAAACCGTTATAAAAGAGGAACATTCAGTGGAAGATCATCCAGAGAGTTCAAGCTCCCCTGACACCTCCAACAAGAACTCGTCTCCTCGTGATGCAAGCCAATCTGTTCCCAATAAGGAGAAAAATAATAGGGCTGAACCTTGGGACGCAAAATTGGATCTTTGGAAACCTTTGAATTGTTTGGTGGAGGTTGCAAGCAGGAGCAAATCTTTCAAGTCCAATGTGCAAGGATGTGATGCTAAACAAGAACCTACTCAAATAAATGAGAATGATTCTCAAGTACAAAAACCCAAAATTAAGGACAACAGACGAAAGTCAAAATTTGAGGATAAAAAGATCGTAACAGAACCTGCTTCTCCAGATACTGAGAAACCAAATAAATCGCGCAGAAATGGCCGAAAAAAGGAACCTGTTGTGGGTGAATCAAGCATATCATCCCAAGCTGTGCTGGATGCAAACAGTGCTAAAATGAAAGATAGAAATGGTCCAATATGGTTCTCCTTAGTAGCCTCTGAAGACCAGAACAAAGATGAGCCACTACCCCAAATTCCTGCAGGTTACTTAAGAATAAAGTCTCGCATATTGGTTGAGATTAAATGCATGGGACAACCAGTGGTCCCTACATTGCAACTTTATAACTTGGTTGACTTGTGGCTGCAAACAACATCGACATCACAGAGAATCCCAGCAGCCGTTGGAGCATCAGCAAAGGATTTTGTTATGGTTCTGACCTATGCTCGCAAGCAGGCCCCGCCTTTTTGA 2562 0.427 MTKADTQIKSLSSHTAIPKLVNYNPQLSQLTRRPHFSVSVVQGSVVDLQPTLKKKTAVSRSWILLDRNGNGTVLEADKYTIMRLVEIHARDLRILDPLLSYPSTILGREKIIVLNLEHIKAIITSEEVLLRDPLDDDVIPIVEQLQRRLPIVSGTGQGQGEEEETSAQEVEGDEENEFPFEFRALEVALEAICSFLDARTRELENAAYPALDDLTSKISSRNLDRVRKLKSAMTRLTNRVQKIRDELENLLDDDDDMTDLYLSRKMAASCSPTSSCDAPNWILSSPTIGSRVRRSSRASATTFQGENDVEELEMLLEAYFMQIDGTLNKLTTLREYIDDTEDYINIQLDNHRNQLIQLELFLSSGTVCLSIYSLVGAIFGMNIPYTWKEGHSYMFKWVVIYTGIVCGSLFLSIVSYARRKVIVLHYCLLRHSVNQYDGGGFPDTEADASELTYEDYNNTQLLKVNADDYNEMDVNFSRVSLVIACTEWILCRKCIYDKITDEELECCPICNIDLGCTPLEKLRPDHSLQDVRAKIFPLKQSKEKAPEVVPPEPLPARRKERSLSSLVVSTPRVSTQTTMTGRRTKPTRKASARSTSFSIEKTVIKEEHSVEDHPESSSSPDTSNKNSSPRDASQSVPNKEKNNRAEPWDAKLDLWKPLNCLVEVASRSKSFKSNVQGCDAKQEPTQINENDSQVQKPKIKDNRRKSKFEDKKIVTEPASPDTEKPNKSRRNGRKKEPVVGESSISSQAVLDANSAKMKDRNGPIWFSLVASEDQNKDEPLPQIPAGYLRIKSRILVEIKCMGQPVVPTLQLYNLVDLWLQTTSTSQRIPAAVGASAKDFVMVLTYARKQAPPF 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1274 853 MobiDBLite consensus disorder prediction 563 599 - -
Lele08g1274 853 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 473 552 IPR013083 -
Lele08g1274 853 FunFam Magnesium transporter MRS2-1 50 133 - -
Lele08g1274 853 Coils Coil 226 253 - -
Lele08g1274 853 MobiDBLite consensus disorder prediction 669 745 - -
Lele08g1274 853 MobiDBLite consensus disorder prediction 540 648 - -
Lele08g1274 853 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 51 421 IPR039204 -
Lele08g1274 853 MobiDBLite consensus disorder prediction 669 693 - -
Lele08g1274 853 Pfam CorA-like Mg2+ transporter protein 311 411 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Lele08g1274 853 MobiDBLite consensus disorder prediction 600 615 - -
Lele08g1274 853 MobiDBLite consensus disorder prediction 616 641 - -
Lele08g1274 853 MobiDBLite consensus disorder prediction 152 173 - -
Lele08g1274 853 CDD Mrs2_Mfm1p-like 62 420 IPR039204 -
Lele08g1274 853 Gene3D Magnesium transport protein CorA, transmembrane region 141 355 - -
Lele08g1274 853 Gene3D - 45 133 - -
Lele08g1274 853 MobiDBLite consensus disorder prediction 694 737 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1274 Lele-ChrLele08 8106148 8117740 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1274 51 398 MRS2 Gene Family AT5G64560 74.432 1.60e-161 473
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g1274 08 8106148 8117740 Lele13g1952 13 27056538 27058744 CCT
Lele08g1274 08 8106148 8117740 Lele14g1881 14 25382179 25386665 CCT
Lele08g1274 08 8106148 8117740 Lele15g0458 15 2657326 2659534 CCT
Lele08g1274 08 8106148 8117740 Lele16g0480 16 2627068 2631465 CCT
Lele05g1419 05 9002375 9013182 Lele08g1274 08 8106148 8117740 hybridization
Lele06g1280 06 8155041 8165261 Lele08g1274 08 8106148 8117740 hybridization