Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1272 ATGTCCTTCAAGGTTTTGTCTTCTTCTCTTTCGCCTTTTAGGCAGACAGAAGCCAAAATGGAAGAGGTTGAAGAAGCTAACAGAGCAGCTGTTGAAAGCTGTCATAAGGTTCTAAGCTTGTTGTCTCCCTCTCATCCCCAAGATCAAGTTCAGCATAGGAAGTTAATGGTAGAAACTGGGGAGGCTGTGGGGAAGTTCAAGAAAGTTGTTTCTCTGCTCAGTAACGGTTTGGGTCATGCAAGAGTCAGGAAACTCAAAAGGCTTCAAATTCCTATTCCTCAAAGCGTACTCTTAGACAACCCTAATTGTAGAACTAATTATCAATTAAAAAATTTGCAATTTCCCCAAAACAGCTTTAGGGAAGAGTCGATTCAGGAATTGAGAAATTCACTCTCCCTGGGAAATCCATCGTTGGAATTGAGCTCGAGTGGGAAAAGTCCTCTCCAACTGACCCAGCAACCATCTTCACGGCACTATCACTTCCTTCAGCAGCAGCAACAAAGGTTATTGCTACAGCATCATCAACAGCAGATGAAACACCAAGCAGATTTGATGTATCGAAGGAACAATGGTGGCATAAATCTGAATTTTGATAGCTCTAGCTGTACACCTACAATGTCATCAACTAGGTCTTTTATTTCTTCCTTAAGCATAGATGGAAGCGTAGCTAACATGGATGGAAGTGCCTTTCATTTAATCGGTGCTCCTCTCTCTTCAGATCAGAATTCACTACAGCATAAAAGAAAGTGTTCTGGTAGAGATGAGGGCAGCGTCAAGTGTGGGAGCAGCAGTACCAGATGCCACTGCTCAAAGAAGAGGAAACACAGGGTAAAGAGTTCAATTAAGGTTCCTGCTATCAGCAACAAGCTTGCAGATATACCCCCTGATGATTATTCATGGAGAAAGTATGGGCAGAAGCCAATTAAGGGCTCTCCTCACCCTAGGGGATACTATAAGTGCAGCAGCATGAGAGGTTGCCCTGCTAGGAAGCATGTTGAGAGGTGCTTGGAAGACCCTTCCATGCTAATTGTTACCTATGAAGGCGAGCATAACCACCCCAAAATACCAACACAATCTGCAAATGCATGA 1089 0.4353 MSFKVLSSSLSPFRQTEAKMEEVEEANRAAVESCHKVLSLLSPSHPQDQVQHRKLMVETGEAVGKFKKVVSLLSNGLGHARVRKLKRLQIPIPQSVLLDNPNCRTNYQLKNLQFPQNSFREESIQELRNSLSLGNPSLELSSSGKSPLQLTQQPSSRHYHFLQQQQQRLLLQHHQQQMKHQADLMYRRNNGGINLNFDSSSCTPTMSSTRSFISSLSIDGSVANMDGSAFHLIGAPLSSDQNSLQHKRKCSGRDEGSVKCGSSSTRCHCSKKRKHRVKSSIKVPAISNKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEDPSMLIVTYEGEHNHPKIPTQSANA 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1272 362 Pfam Plant zinc cluster domain 247 292 IPR018872 -
Lele08g1272 362 SMART WRKY_cls 294 354 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele08g1272 362 FunFam WRKY transcription factor 65 278 355 - -
Lele08g1272 362 Pfam WRKY DNA -binding domain 296 353 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele08g1272 362 Coils Coil 13 33 - -
Lele08g1272 362 MobiDBLite consensus disorder prediction 242 263 - -
Lele08g1272 362 ProSiteProfiles WRKY domain profile. 289 355 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele08g1272 362 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 21 359 IPR044810 GO:0003700
Lele08g1272 362 SUPERFAMILY WRKY DNA-binding domain 292 354 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele08g1272 362 Gene3D WRKY domain 277 356 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1272 Lele-ChrLele08 8091807 8094019 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1272 20 359 WRKY Transcription Factor Family AT2G30590 57.784 2.88e-130 376
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele08g1272 WRKY 1.6e-26 CL0274