Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1254 ATGGCTTGTTCTGGAAGTAATAGTGGGAATGGAGCAGGGTCAGGGTCTCCTTGCGGGGCATGCAAGTTTCTGAGAAGGAAGTGTTCGGCTGATTGTATATTTGGGCCTTATTTCTGCTCCGAACAAGGCCCTGCTAGTTTTGCCGCCATTCACAAGGTGTTTGGAGCCAGTAATGTTTCCAAACTGCTCTTGAACTTACCTGCTCATGATCGTTGTGAGGCTGTCCTCACTATTGCCTATGAAGCTCAGGCTCGTATCAGAGACCCTGTTTATGGCTGTGTCTCCCACATTTTTGCCTTGCAACAACAGGTGGCATGTTTGCAAGCACAGCTGATGCAAGCCAAGGCGCAGTTGGCTCAGAAGAGCATGGAGAAAAATAATGAAGAGTACTGGGGAAGGAATAATGTTTATGGGCAAGCGATGAATCCAATGTATGGAACTAGTAATTACACCAACATGAACCCTATATCTCCTCAGAGTTCTCTTGACTCCATTGATTACTCTAGCATCCACGATAATGGATCCATGATGAGTAGTTTGCAGCAAAAGGGTTTCTCTTTCCAGCAACAAGCTCGCTCCAAGAAAAGCCCATCTTATGATAGCAATGACTTGAGTGAGCTTCAAGAGCTAGCACTCAGAATGATGAGAAACTAG 654 0.4572 MACSGSNSGNGAGSGSPCGACKFLRRKCSADCIFGPYFCSEQGPASFAAIHKVFGASNVSKLLLNLPAHDRCEAVLTIAYEAQARIRDPVYGCVSHIFALQQQVACLQAQLMQAKAQLAQKSMEKNNEEYWGRNNVYGQAMNPMYGTSNYTNMNPISPQSSLDSIDYSSIHDNGSMMSSLQQKGFSFQQQARSKKSPSYDSNDLSELQELALRMMRN 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1254 217 ProSiteProfiles LOB domain profile. 16 118 IPR004883 -
Lele08g1254 217 MobiDBLite consensus disorder prediction 181 202 - -
Lele08g1254 217 PANTHER LOB DOMAIN CONTAINING PROTEIN 13 207 - -
Lele08g1254 217 Pfam Lateral organ boundaries (LOB) domain 17 115 IPR004883 -
Lele08g1254 217 Coils Coil 97 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1254 Lele-ChrLele08 7983706 7984697 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1254 1 217 AS2 family AT2G42430 55.200 2.58e-78 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele08g1254 LOB 5.3e-36 No_clan