Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1252 ATGGCCTTCGCCTCTTTTCTTGGCAGAGTCCTCTTCGCCTCCGTTTTCATTCTCTCTGCTTACCAAGAATTCAATGAATATGGGGTAGACAGTGGACCTGCAGCGAAGGCACTCAGACCGAAGTTTGATGCTTTTACACATCGGGTGCACTCTCATGCTGGCTTTCAACTTCCAGAACTTGATATTAAATATTTGGTTGCGGGAGCTATTGCACTCAAGGGAATTGGGGGGCTTCTTTTCATCTTTGGAAGCGTTTTTGGAGCCGTCCTCCTGATGGTTGCGACTCCAATACTTTATGACTTCTACAATTATGATAATGAGGGCAAAGAGTTCAATCAACTTTTCATCAAATTCACACAGAATATGGCTCTTTTTGGGGCTCTGTTGTTTTTCATTGGAATGAAAAACTCCATTCCTAAGAGGCAACCCAAGAAGAAGGCTCCCAAAACAAAAACCTATTAG 462 0.4329 MAFASFLGRVLFASVFILSAYQEFNEYGVDSGPAAKALRPKFDAFTHRVHSHAGFQLPELDIKYLVAGAIALKGIGGLLFIFGSVFGAVLLMVATPILYDFYNYDNEGKEFNQLFIKFTQNMALFGALLFFIGMKNSIPKRQPKKKAPKTKTY 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1252 153 PANTHER HR-LIKE LESION-INDUCER 1 152 - -
Lele08g1252 153 Pfam HR-like lesion-inducing 1 134 IPR008637 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1252 Lele-ChrLele08 7959544 7961669 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g1252 08 7959544 7961669 Lele13g1930 13 26912682 26917817 CCT
Lele08g1252 08 7959544 7961669 Lele14g1863 14 25243691 25249102 CCT
Lele08g1252 08 7959544 7961669 Lele15g0478 15 2795530 2802434 CCT
Lele08g1252 08 7959544 7961669 Lele16g0498 16 2756650 2761452 CCT
Lele13g1926 13 26887795 26888475 Lele08g1252 08 7959544 7961669 CCT
Lele05g1399 05 8840747 8842963 Lele08g1252 08 7959544 7961669 hybridization
Lele06g1260 06 8020091 8022201 Lele08g1252 08 7959544 7961669 hybridization