Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1251 ATGGGTACCAACTTGAGGCAAGTGCTCAGAAGCCTCTGTTTGAATTCTGATTGGAAGTACGCCATCTTTTGGAAACTCAAACATCATACTCGCATGATCTTGACATGGGAGGATGGTTACTATGACAATCCTGATGAACATGACTCTTTCGAGAATAAGCCCAGCCAGAAGGCCTTGGAACAGGTTGATGGCGGTCAATTCTCACATGACCCTCTAGGGTTAGCTGTGGCAAAGATGTCATATCGTGTATATACTTTAGGGGAAGGTATTGTTGGACAGGTAGCTGTTACTGGAAAGCATCAGTGGATCTGTGCCGGTAACCAAGTTGCAGGTCCTAGCTCATCATATGAGTTTGTTGATGACTGGCAATCCCAGTTTTCTGTTGGAATCAAGACCATTGTTGTTGTAGCTGTAGTTCCACTTGGAGTTGTTCAGCTTGGCTCATTAAATAATGTGATAGAAGATACAGAGTTTGTAACTCATATCAGAAATCTTTTTCTGGCTGCTCAGCATTATACAATAGGCCATTCTCTTGATCAAATACAAAGTAGTGCGAAGAATGTCTCACCTCTGGATATGGAGAAAATCAGAAAGAGTGAGACGCTGAATAACTTGATGTCCTTCCCATGTTCTGAAAAGAGCTTTTCACCTTCCTGTGTTACTCAAGAAATGGCCGTTGATATGGCCAAGCATGAGGGGTCTGAGTTTAACTTTGATGGAAGTTACATCTTACTTCAGTCAGTGTCAAATTTGATGGATCTGGAGGATCAGAAATTCTTGGAGATGAGATCTCTAAACAAGAGAGAGTATGAAAAAGTGGGCAGCAGTGGCTGCAAAGACATGAGGGTGGAATCAGAAAAAAATATGTCATCATTGGCACTCAAATCTGTTTCAAATGATAGCAGCTTCCAAGATTTAATATGTCCATCAGAAAAGGTTGGAGCTCATTCTGCCGGCATCCCTGCAGACTTTGTTGATGCTGTTGTTTATGGGAATGATAAGCTCCCTTATGTGGAGGCTAACCAACAAGGTGTTTTCAGTGTCTTTAGACCTTCAGATGCAAACTTCCAAAAGGGCACATTAAAGTCGGAGTTTCAGACTGATCCTTGTTACAAGGATGTCCCATTCACAAGATTAAAGTTCCCTGCTGGCTGTGAGCTGCATGAAGCACTTGGATCAGATTTTCTGAAACAGAGTAAATACTGTGATTGGGGGGCATGGGTGAATCAAGATGTTAAAACTGCAGAGATGCCAGATGAGATTAGCTGTAGCCAGTTGCCTTCTGAATCTCGTCAAGAACATCTTTTGGAGGCAGTAGTCGCCAATGTTCACCACAGTAATAATGATGCAAATAGCGACTTATCGTTTTGTACATCAGTGCAGTCCGGCATAGCATGTGGAAGAAATCCAGTAGCTTCTATTAATTCAGAGTGTTATTCTATAGATCAGTCCTCTCTTATTATTGAGGACAAACGGCCCTGTTTGGGTTCGTCTGGAATCTGTAGTGTAATTTCCCCCAAAGGTTTTTCTTCTGCGTGTCCTAGTTCATGTAGTGAACTGTTTGAAAGGTCTTCTGAACCAGCTAAGAACAAGAAGAGGGCTAGGGCAGGGGAATCTTGTAGGCCAAGGCCAAGGGACAGACAACTGATTCAAGATCGTATTAAGGAGTTGAGAGAGTTAGTGCCAAATGGGGCAAAGTGCAGTATTGATTCGCTGCTGGAGCGCGCAATAAAGCACATGCTCTTTTTGCAGAGCATAACTAAGCATGCTGATAAGCTAAACAAATTTGCAGACTCCAAGACGAAGGTACATCACATGGAAGCAGATGTTCTTGGATCATCTGGTTATGAACAGGGTTCAAGTTGGGCAATGGAAGTAGGAGGCCATCTGAAAGTTCATTCAATATTAGTGGAGAATCTTAACAAGAATGGCCAGATGCTCATTGAGATGCTGTGTGAGGAGTGCACACATTTTCTTGAGATAGCAGAATCCATAAGAAGCTTGGGTCTGACAATTTTGACGGGTGCAACAGAAGCTCGTGGTGAGAAGACATGGATATGCTTTGTGGTTGAGGGCCAAAACAACTGCAATGTACACAGATTGGATATATTGTGGCCACTCGTGCAAATGCTGCAATCCCAGAGTACTATGCATTCACAATGA 2163 0.4281 MGTNLRQVLRSLCLNSDWKYAIFWKLKHHTRMILTWEDGYYDNPDEHDSFENKPSQKALEQVDGGQFSHDPLGLAVAKMSYRVYTLGEGIVGQVAVTGKHQWICAGNQVAGPSSSYEFVDDWQSQFSVGIKTIVVVAVVPLGVVQLGSLNNVIEDTEFVTHIRNLFLAAQHYTIGHSLDQIQSSAKNVSPLDMEKIRKSETLNNLMSFPCSEKSFSPSCVTQEMAVDMAKHEGSEFNFDGSYILLQSVSNLMDLEDQKFLEMRSLNKREYEKVGSSGCKDMRVESEKNMSSLALKSVSNDSSFQDLICPSEKVGAHSAGIPADFVDAVVYGNDKLPYVEANQQGVFSVFRPSDANFQKGTLKSEFQTDPCYKDVPFTRLKFPAGCELHEALGSDFLKQSKYCDWGAWVNQDVKTAEMPDEISCSQLPSESRQEHLLEAVVANVHHSNNDANSDLSFCTSVQSGIACGRNPVASINSECYSIDQSSLIIEDKRPCLGSSGICSVISPKGFSSACPSSCSELFERSSEPAKNKKRARAGESCRPRPRDRQLIQDRIKELRELVPNGAKCSIDSLLERAIKHMLFLQSITKHADKLNKFADSKTKVHHMEADVLGSSGYEQGSSWAMEVGGHLKVHSILVENLNKNGQMLIEMLCEECTHFLEIAESIRSLGLTILTGATEARGEKTWICFVVEGQNNCNVHRLDILWPLVQMLQSQSTMHSQ 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1251 720 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 166 IPR025610 -
Lele08g1251 720 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 719 IPR043561 GO:0003700|GO:0006355
Lele08g1251 720 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 534 583 IPR011598 GO:0046983
Lele08g1251 720 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 547 589 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1251 Lele-ChrLele08 7953236 7958300 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1251 1 715 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 41.894 9.88e-147 444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g1251 08 7953236 7958300 Lele08g1251 08 7953236 7958300 ECH
Lele05g1398 05 8832877 8838981 Lele08g1251 08 7953236 7958300 hybridization
Lele06g1259 06 8013210 8018294 Lele08g1251 08 7953236 7958300 hybridization