LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele08g1250	ATGTCATTTTGGGTGATCTGTAAACATTACAGGCCTCACTTTCTCATGGTTTTTGTTCAGGGGGCCGTCACACTTCTCTATTTTCTGATAGAGGCTTCCATCAACAAGGGCATGAACCTTCCTGTTTTTCTGACTTACCGCCATGCTCTTGGTGCTATTGTGGTGCTTCCTTTTGCCTATGTACTTGAAAGAAAATCTAGGCCGAAGATGACGGTGGCGATGTTCATGGAGCTATTTTTGCTCTCCCTTTTGGGGGTTAGCCTTACCCTAAACATGTATTTCGCAAGCTTGAAGTATACCTCTCCTTCCTTTGTCACATCAATGGTTAACACAATATCAGCTCTAACATTTATAATTGCAGTTGCACTCAGGTTAGAGGCTGTTCATGTTAAGAACCCTCGTGGGGTAGCTAAGATCTTTGGAACCCTTCTATCATTGGCTGGGGCATTGACAATGACTTTGTATAAAGGGCATGCCATACCAAGCTTGAAAGCTGTTCCAATCCTAATCAGAGGCCAATCTGCTCATACTAATTGGCTCAAGGGATCTTTTTTAACTGTTGCCAGTTGCATATCATGGTCTGTCTTCTACATAATGCAGGCATTTACAGTGAAGAAATATCCAGCACAGCTTTCGCTCACTGCATGGATAAATGGTATCGGTGCAGTACAATCAGCAGCCTTTGCAATAATCGTTGAACATAAACTCCATGCCTGGTTCATTACATCCAGAATCGAATTATACTGCATCTTATATGCTGGAACTGTAAGTTGTGGTTTGAGTATTTTCATTCAGTTGTGGGCTACGGACCAAAAGGGACCTGTCTTCGTGACTATGTTCAATCCCCTTGGGACAGTCTTAGTGTCAATCCTTGCATATTTTGTTATGGGGGAACAGCTTCACATGGGCAGTATCCTTGGAGGAGTCATCGTTATCATTGGCCTTTACTTGCTTTTATGGGGAAAAGAAAGTCATCAAGATTTCGAATCACGACAACTATCAAGTTCAACAACATATGAGCAAAGGGAAAGCAGGACGCAGGTAGTGACTTCAAGGCAGACACATAAGTTAAGCTCTGAACAAGGCAGGGTCATAAAAGAATCACAATAG	1110	0.4252	MSFWVICKHYRPHFLMVFVQGAVTLLYFLIEASINKGMNLPVFLTYRHALGAIVVLPFAYVLERKSRPKMTVAMFMELFLLSLLGVSLTLNMYFASLKYTSPSFVTSMVNTISALTFIIAVALRLEAVHVKNPRGVAKIFGTLLSLAGALTMTLYKGHAIPSLKAVPILIRGQSAHTNWLKGSFLTVASCISWSVFYIMQAFTVKKYPAQLSLTAWINGIGAVQSAAFAIIVEHKLHAWFITSRIELYCILYAGTVSCGLSIFIQLWATDQKGPVFVTMFNPLGTVLVSILAYFVMGEQLHMGSILGGVIVIIGLYLLLWGKESHQDFESRQLSSSTTYEQRESRTQVVTSRQTHKLSSEQGRVIKESQ	369

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele08g1250	369	Pfam	EamA-like transporter family	181	319	IPR000620	GO:0016020
	Lele08g1250	369	Pfam	EamA-like transporter family	34	152	IPR000620	GO:0016020
	Lele08g1250	369	MobiDBLite	consensus disorder prediction	332	358	-	-
	Lele08g1250	369	MobiDBLite	consensus disorder prediction	332	369	-	-
	Lele08g1250	369	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	46	157	-	-
	Lele08g1250	369	PANTHER	WAT1-RELATED PROTEIN	13	333	IPR030184	GO:0016020\|GO:0022857
	Lele08g1250	369	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	237	324	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele08g1250	Lele-ChrLele08	7941522	7943240	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele08g1250	33	360	Nodulin-like Gene Family	AT3G18200	37.273	1.12e-76	239