Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1242 ATGTCTTCACCGTCCTATCAGCAATCATGCCCAGATTTGAAGTTCTTGCAGGAGCCTTCTGATACTTTCTTGGTCTCTCTGTCAAGCAACCAAGTTCACGAAGACCCTTTCCACGATTATCTCTGCTTCGATATGATTGACAAGGAGGCAAATCAACCGCCTGTGAGTTCGGAAGCCATAGAAGCCGGCGAGACTGTCAAGGAAAGATCATACATAGGGGTGAGGAAGAGACCTTGGGGCAAATTTGCAGCAGAGATCAGAGACACTACCAGGAATGGAACCAGAGTTTGGTTGGGAACGTTCGAGAGTGAAGATGAGGCTGCTTTAGCCTATGACCAAGCTGCATTCACCATGAGAGGCAACGGCGCTGTTCTTAATTTTCCGGTGGAGAGGGTGAAGAAGTCTCTGCGAGACATCAAGTATGGTTGCCGCAAAGGGTGTTCGCCAGCTTTAGCACTAAAAGAGAGGCACTACATCCAAAAAAAACTGTCGTCAAAGGCTAAGAAAGACAAAGCCAAACAGCAATCAGAGGTGGTGGTGCTTGAGGACTTGGGTGTTGAATATCTGGAGCAACTTCTCAGCATATCTGATCAAACTGCAAGCCCTATTTAG 612 0.4739 MSSPSYQQSCPDLKFLQEPSDTFLVSLSSNQVHEDPFHDYLCFDMIDKEANQPPVSSEAIEAGETVKERSYIGVRKRPWGKFAAEIRDTTRNGTRVWLGTFESEDEAALAYDQAAFTMRGNGAVLNFPVERVKKSLRDIKYGCRKGCSPALALKERHYIQKKLSSKAKKDKAKQQSEVVVLEDLGVEYLEQLLSISDQTASPI 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1242 203 FunFam Ethylene-responsive transcription factor 2 69 130 - -
Lele08g1242 203 PRINTS Ethylene responsive element binding protein signature 71 82 IPR001471 GO:0003700|GO:0006355
Lele08g1242 203 PRINTS Ethylene responsive element binding protein signature 94 110 IPR001471 GO:0003700|GO:0006355
Lele08g1242 203 SUPERFAMILY DNA-binding domain 71 130 IPR016177 GO:0003677
Lele08g1242 203 SMART rav1_2 70 134 IPR001471 GO:0003700|GO:0006355
Lele08g1242 203 Pfam AP2 domain 71 120 IPR001471 GO:0003700|GO:0006355
Lele08g1242 203 ProSiteProfiles AP2/ERF domain profile. 70 128 IPR001471 GO:0003700|GO:0006355
Lele08g1242 203 PANTHER DNA-BINDING DOMAIN 54 194 IPR044808 GO:0003700|GO:0009873
Lele08g1242 203 CDD AP2 71 129 IPR001471 GO:0003700|GO:0006355
Lele08g1242 203 Gene3D AP2/ERF domain 70 130 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1242 Lele-ChrLele08 7895339 7895950 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1242 33 201 AP2-EREBP Transcription Factor Family AT3G23240 48.603 4.53e-56 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele08g1242 AP2 6.3e-14 CL0081