Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1240 ATGTCTTGGCCGTCAACGCAGCAACCACACCCAGATTGGGAGTTCTGGCAGGAGACCTCCGATCCTTTCTTGGTCTCTTCATCAAGCAACCAAGTCCATGAAGACTCTGCCCTCGATTATCTTTGCTTCGATATGATTGACAAGGAGGCAAATCAACCGCAGGTGAGTTCGGAAACCATAGAAGCCGAGACTGTCAAGGAAAAAGCATATATAGGGGTGAGGAAGAGGCCTTGGGGGAAATTTGCAGCTGAGATCAGAGACACCACCAGGAATGGCACCAGAGTTTGGCTCGGAACGTTCGACACTGCAGAGGAGGCTGCTTTAGCTTATGACCAAGCTGCATTCACCATGAGAGGCTACACCGCTGTTCTTAATTTTCCGGTGGACAAGGTGAAGAAGTCTCTGCAAGAAATCAAGTATGGTTGCCGCAAAGGGTGTTCGCCCGCTTTAGCCCTGAAAGAGAGGCACTACATCCAAAGAAAAATGTCGTCAAAGGCTAAGAAGGACAAAGCCAAACAGCAATCAGAGGTGGTGGTGCTTGAGGACTTGGGTGTTGAATATCTGGAGCAACTTCTCAGCATATCTGATCAAACTGCAAGCCCTAGGTAG 609 0.491 MSWPSTQQPHPDWEFWQETSDPFLVSSSSNQVHEDSALDYLCFDMIDKEANQPQVSSETIEAETVKEKAYIGVRKRPWGKFAAEIRDTTRNGTRVWLGTFDTAEEAALAYDQAAFTMRGYTAVLNFPVDKVKKSLQEIKYGCRKGCSPALALKERHYIQRKMSSKAKKDKAKQQSEVVVLEDLGVEYLEQLLSISDQTASPR 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1240 202 FunFam Ethylene-responsive transcription factor 2 68 129 - -
Lele08g1240 202 Gene3D AP2/ERF domain 68 129 IPR036955 GO:0003700|GO:0006355
Lele08g1240 202 SUPERFAMILY DNA-binding domain 69 128 IPR016177 GO:0003677
Lele08g1240 202 CDD AP2 70 129 IPR001471 GO:0003700|GO:0006355
Lele08g1240 202 ProSiteProfiles AP2/ERF domain profile. 69 127 IPR001471 GO:0003700|GO:0006355
Lele08g1240 202 PANTHER DNA-BINDING DOMAIN 36 195 IPR044808 GO:0003700|GO:0009873
Lele08g1240 202 Pfam AP2 domain 70 119 IPR001471 GO:0003700|GO:0006355
Lele08g1240 202 PRINTS Ethylene responsive element binding protein signature 93 109 IPR001471 GO:0003700|GO:0006355
Lele08g1240 202 PRINTS Ethylene responsive element binding protein signature 70 81 IPR001471 GO:0003700|GO:0006355
Lele08g1240 202 SMART rav1_2 69 133 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1240 Lele-ChrLele08 7879139 7879747 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1240 33 200 AP2-EREBP Transcription Factor Family AT3G23240 48.603 2.37e-57 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele08g1240 AP2 2e-15 CL0081