Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1230 ATGGCTTCACTCTCAACATGGTTTCGGTACATGGCTCACAAGGTCGAGTTCTCCATATCAATCGGCATGAAGACCTATAAAGGGGGCCAAATTACGGACAAAGAAGTAAATCATGTTATCTGGAAGAATCTCCTTCAAGGAAGGTTGACGTACTTGCAGTTGAACAAAGGACAGGAAATGGCCCCTGCCCTAGATGGAAAAGGAGCAACTCTTCTTGTTCGGAAGTTACCAAAAGCAGACCTAACGCGTGTCTTTGTAGGAGATGTAGTCGTTTTGAAGGACCCTGAGAAGCAAAACAATCATTTAGTCAGAAGACTGGCTGCCATCGAAGGCTATGAAATGGCTTCTACAGATGAAAAGGATGAACCTTTTATTCTTGAGGAGGATCAATGTTGGGTGTTGGCTGACAATCAAAATTTAAAACCCAAGGAAGCATATGATAGTAGAATATTTGGTCCAGTTCAAATGACAGACATTGTGGGCAGAGTCATATACTGCTTGCGATCTGCAGTAGACCATGGCCCTGTACAGAACAGTCACTTTGGCATGCAGAGGGATTCGTCAGTGTTGGCAATGGAACTGGATATTGATGAGATGGCAAAGAGTAACAAAGCCTGA 618 0.4369 MASLSTWFRYMAHKVEFSISIGMKTYKGGQITDKEVNHVIWKNLLQGRLTYLQLNKGQEMAPALDGKGATLLVRKLPKADLTRVFVGDVVVLKDPEKQNNHLVRRLAAIEGYEMASTDEKDEPFILEEDQCWVLADNQNLKPKEAYDSRIFGPVQMTDIVGRVIYCLRSAVDHGPVQNSHFGMQRDSSVLAMELDIDEMAKSNKA 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1230 205 Gene3D Umud Fragment, subunit A 53 184 - -
Lele08g1230 205 PANTHER OSJNBA0068L06.9 PROTEIN 1 204 - -
Lele08g1230 205 SUPERFAMILY LexA/Signal peptidase 57 176 IPR036286 -
Lele08g1230 205 CDD S26_SPase_I 60 163 IPR019533 GO:0004252|GO:0006465
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1230 Lele-ChrLele08 7796937 7800744 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1230 60 176 MADS-box Gene Family AT1G29960 28.455 6.87e-07 45.1