Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1224 ATGGGTCTGAGAGACTTTGGAGCTTCACTGCCTCCTGGGTTTCGGTTTCATCCGAGTGATGAAGAATTGGTGTGTCATTATCTCTACAAAAAGATCTCAAACGAGGAAGCTCTCAAGGGGACTTTGGTCGAAATCGACTTGCATACATGCGAACCATGGCAACTTCCTGAGGTGGCTAAGCTGAACGCGAATGAGTGGTACTTCTTCAGCTTCCGTGACCGGAAATACTCGACGGGGTTGAGGACCAATAGGGCGACGACATCTGGATATTGGAAGGCAACGGGGAAGGATCGGACGGTTGTGGATCCGATCACGAGAGAGGTTGTAGGGATGAGGAAGACGTTGGTGTTCTACAGGAACAGGGCTCCCAATGGTATCAAAACGGGTTGGATCATGCATGAGTTCCGCTTGGAGACCCCACACATGGCCCCTAAGGAGGACTGGGTTTTGTGTAGAGTATTTCACAAGAACAAATCAGATGACAACAACAACAACAACGATATCATGAATGCCAAGCTCATGTTGGACTCAATTTCATCTCCTTCCCTAACTCTGGCTTCTTCATCTTCCCCAGCCAACCATAATACCTTCCCTCTCGTCTCTTACAACCAACTTTCCTCTTCCTCCTTCATTAACCACCACGATCATCATCATTCTAATAATTCTCTCGTCAACTTTCTTCAATTTCCTCGGGAAACAAACACCGCCGCCACCAGCACCGTTACTCACGACCAGATTAGCCCCAGAGGCGGCAGGGATGATGGCAGCTATGGCTTCTTCTGGGACATGGGCCTCGAAGATAACATGTACAGCAGCTTTCACAATGGCGTCGACGCTATGAAATCCTTCAAGAAACTTCTGCATAGCTTGAATGGCAAGGTCACCAGCTCCAAGTTCGATGGCACGGTGGGTTCGACGAACACTTTAAGGTGGGTTGCAGATTTGAATGGTTTGACGGTGGGTTACAGATCTGAACGAGCTCCGCTCCACCGTCGACCTTCACTTTTCTAG 1011 0.4896 MGLRDFGASLPPGFRFHPSDEELVCHYLYKKISNEEALKGTLVEIDLHTCEPWQLPEVAKLNANEWYFFSFRDRKYSTGLRTNRATTSGYWKATGKDRTVVDPITREVVGMRKTLVFYRNRAPNGIKTGWIMHEFRLETPHMAPKEDWVLCRVFHKNKSDDNNNNNDIMNAKLMLDSISSPSLTLASSSSPANHNTFPLVSYNQLSSSSFINHHDHHHSNNSLVNFLQFPRETNTAATSTVTHDQISPRGGRDDGSYGFFWDMGLEDNMYSSFHNGVDAMKSFKKLLHSLNGKVTSSKFDGTVGSTNTLRWVADLNGLTVGYRSERAPLHRRPSLF 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1224 336 Gene3D NAC domain 19 161 IPR036093 GO:0003677|GO:0006355
Lele08g1224 336 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 217 - -
Lele08g1224 336 ProSiteProfiles NAC domain profile. 10 156 IPR003441 GO:0003677|GO:0006355
Lele08g1224 336 Pfam No apical meristem (NAM) protein 11 137 IPR003441 GO:0003677|GO:0006355
Lele08g1224 336 SUPERFAMILY NAC domain 8 157 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1224 Lele-ChrLele08 7729797 7734862 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1224 8 224 NAC Transcription Factor Family AT1G56010 48.444 4.31e-65 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele08g1224 NAM 3.8e-38 No_clan