Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1218 ATGAAAGTGGGATTTGAGGTGATTCATGGCGATTTCAACATGATCCGACCACATATGCATGAATCTTGGGACTACCCGAATAATGTTGGGTTGTCTTCATCAGCTGCAACATCATCATCGTCATCAATCCCATTTTCAAAGCAGCCACCACCCATTGACAATACTCTAAACCTGCAGGCAACAAACGAGTTTTCAGATTGGGTGGAGCATTTTACCAAGCACCTTGTGGACGACTTACCAGCTGAAACCACCACATCTGATCATAACTTTCTTCCTCCTTATAACCACCATCACCAAACAAGGTCTTCTTCTCATGACAACCTCGTAGCCACACTAGTTTCACCTGTTGTTGTATACCCTAGAAAAGTCCATGCTCCCTTCAACAATAACAACCTGCAAATTCAAACTCAAACTCAAACACAAACACAAACAAACCGAGTAGATCATCATCACGACCAAAACAATGATGGTGATGGTTTACAGCTTTTAACACTTCTAATGGAGTGTGCAGTTGCAATCTCAGTGGACAACCTCAGTGAAGCACACAGGATGTTGCTCGAGCTAACCCAAGTTGTCTCACCTTACAAGCCTTCCTGTGCAGAGCGTATTGTAGCGTACTTCGCTAAAGCCATGGCTAGCAGAGTAATGAACTCATGTCTTGGAGTATTTTCCCCATTGATTGATCACAGAAGAATTCACTCTTCATTCCAAGTGTTCAACAACATTTCACCTTTCGTCAAATTCGCTCATTTCACTTCAAATCAAGCCATTTTCGAAGCAGTGCATTACAGTGATAACATTCATATAATAGACTTAGACATTATGCAGGGTCTTCAATGGCCAGCCTTCTTCCACATCCTCGCCACACGAATGGAAGGTCGACCAAGAGTTCGAATGACAGGCATGGGGGCTTCCATGGACCTCCTCGTAGAAACAGGAAAACAACTGACGAACTTCGCTAAAAGGTTGGGAATGTCGTTTTATTTCCAACCAATCGCGAGGAAGTTCGGGGAAATCGAGGATGTTGTCTCCATGGTGCAAGGAAGACCCGGAGAGACACTCGCGGTTCACTGGCTACAACACTCGCTGTACGACGCCACTGGACCAGACTGGAAAACTCTCAGACATCTTGAAGAACTAGAGCCAAGGATCATAACGTTGGTCCCGATGAGCCCTAATTCTATGGCTCAAGCTCAATTGATATTGAACATGTTCTCATCGTCTCCTTCTTCTTCTGGTGGCCATGGTTATACTCTGGCTCAAGTTGATGGCACGCTCAGGCTTGGATGGAAGAACACTGGCTTGTATACTGCTTCTTCATGGACATTTATGGGAATGGAATCTTCTGCGCTTGTCTCTCCTTGGATGTGCTATCCCGTATATATATTGATGAGCAAACGAATTGCCTTCGCGTTGGGGGTAGTTGATGGGCTTGTATTGGATGAAAGGGAAGCTGAACATGAAGATGATGCTGGAGGATTAGTTGTTGATTTCGGTCCGAATTTGAGAAGAAAATTCCAATACATTTGCTGTCTGTGGGGAAGGTGTATTGAAGATCATTTCATCATGGATCATTTGGTTGGTGGAAAGTTTAAACTGGGAAGGAAAATTGGGAGTGGTTCTTTTGGGGAGCTTTATTTAGGCGTAAATGTGCAAAATGGAGAGGAGGTGGCCGTTAAGCTGGAACCTGTGAAGACCAGGCATCCTCAACTTTTCTACGAGTCAAAATTGTATATGCTTCTTCAAGGAGGAACGGGGATTCCCCACATCAAATGGTTTGGGGTCGAGGGAGACCATAATGTCATGGTTATTGACCTTCTTGGACCAAGTCTGGAAGATTTGTTCAACTATTGCAACCGGAAATTCACATTGAAGACTGTGTTAATGCTTGCTGATCAGTTAATTAACAGAGTCGAGTATATGCATTCAAGAGGTTTTCTTCACCGTGATTTAAAGCCTGACAATTTTCTTATGGGCCTAGGACGTAAAGCAAACCAGGTGTACATAATTGACTATGGCCTTGCGAAGAAGTATAAGGATCTTCAGACTCATAAGCACATACCATACAGGGAAAACAAGAACCTCACTGGCACAGCTCGCTATGCTAGTGTGAACACTCATCTTGGAATTGAGCAAAGCAGAAGGGACGATCTGGAATCTCTTGGTTACGTTCTCATGTATTTCTTAAGAGGAAGTCTTCCTTGGCAGGGACTCAAGGCTGGCACAAAAAAACAAAAATATGATAAGATCAGTGAGAAGAAGGCATCAACCCCCACAGAGGTGCTCTGTAAATCATACCCATCTGAGTTTGTATCTTACTTCCACTACTGCCGGTCTTTGCGTTTTGAGGACAAGCCAGATTATTCGTATTTAAAGAGACTTTTTCGAGACTTATTTATTCGAGAAGGCTATCAGTTTGACTATGTTTTCGATTGGACTATATTGAAGTATCCACAGATTGGTTCTAGCTCTAGAGGACGGCATGGCAGTGGCAAAGCAGCTATGAATGCAGGACCATCTGTGCAAAAGCCAGAAAAGATGTCAGCCGGGAAAGATCCTCGAGAGAAATTCCCTGGCGCTGTTGAAGCATTCTCCAGGAGAAACCCCACAAGTCCTGGTCCTCAGGGTGATCAAGCTAAGCAAAGGATGTTTGAGGATGTACAGCAACATAAGGATATGCACCGTGAACAAGAGAAGGTACACAGTTCTGCCCGATATGGAAGCAGTTCAAGAAAAGCCCTCATCTCATCAAACAAGCCCAGTGCATCGGCTGACCACAGCGATATTCGTACTGGTCGGCTGACTACAACTACTAGCAGTAGCCGGCCTTCTACCACAGCCGCTTTGTATGAGAGCAAGCAACCAGGTTTTACACGCAATACATCTTCCAGAGGCAACCGTGATGATCCTCTTAGGAGCTTTGAACTTCTTTCTATCAGGAAGTAA 2946 0.443 MKVGFEVIHGDFNMIRPHMHESWDYPNNVGLSSSAATSSSSSIPFSKQPPPIDNTLNLQATNEFSDWVEHFTKHLVDDLPAETTTSDHNFLPPYNHHHQTRSSSHDNLVATLVSPVVVYPRKVHAPFNNNNLQIQTQTQTQTQTNRVDHHHDQNNDGDGLQLLTLLMECAVAISVDNLSEAHRMLLELTQVVSPYKPSCAERIVAYFAKAMASRVMNSCLGVFSPLIDHRRIHSSFQVFNNISPFVKFAHFTSNQAIFEAVHYSDNIHIIDLDIMQGLQWPAFFHILATRMEGRPRVRMTGMGASMDLLVETGKQLTNFAKRLGMSFYFQPIARKFGEIEDVVSMVQGRPGETLAVHWLQHSLYDATGPDWKTLRHLEELEPRIITLVPMSPNSMAQAQLILNMFSSSPSSSGGHGYTLAQVDGTLRLGWKNTGLYTASSWTFMGMESSALVSPWMCYPVYILMSKRIAFALGVVDGLVLDEREAEHEDDAGGLVVDFGPNLRRKFQYICCLWGRCIEDHFIMDHLVGGKFKLGRKIGSGSFGELYLGVNVQNGEEVAVKLEPVKTRHPQLFYESKLYMLLQGGTGIPHIKWFGVEGDHNVMVIDLLGPSLEDLFNYCNRKFTLKTVLMLADQLINRVEYMHSRGFLHRDLKPDNFLMGLGRKANQVYIIDYGLAKKYKDLQTHKHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYDKISEKKASTPTEVLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTILKYPQIGSSSRGRHGSGKAAMNAGPSVQKPEKMSAGKDPREKFPGAVEAFSRRNPTSPGPQGDQAKQRMFEDVQQHKDMHREQEKVHSSARYGSSSRKALISSNKPSASADHSDIRTGRLTTTTSSSRPSTTAALYESKQPGFTRNTSSRGNRDDPLRSFELLSIRK 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1218 981 Gene3D Transferase(Phosphotransferase) domain 1 515 856 - -
Lele08g1218 981 MobiDBLite consensus disorder prediction 888 902 - -
Lele08g1218 981 ProSiteProfiles GRAS family profile. 153 442 IPR005202 -
Lele08g1218 981 FunFam Casein kinase 1-like protein 523 852 - -
Lele08g1218 981 SMART serkin_6 531 809 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g1218 981 ProSiteProfiles Protein kinase domain profile. 531 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g1218 981 MobiDBLite consensus disorder prediction 132 154 - -
Lele08g1218 981 FunFam Putative Casein kinase I 523 607 - -
Lele08g1218 981 SUPERFAMILY Protein kinase-like (PK-like) 526 812 IPR011009 -
Lele08g1218 981 MobiDBLite consensus disorder prediction 965 981 - -
Lele08g1218 981 MobiDBLite consensus disorder prediction 861 880 - -
Lele08g1218 981 PANTHER CASEIN KINASE-RELATED 529 918 - -
Lele08g1218 981 Pfam GRAS domain family 163 388 IPR005202 -
Lele08g1218 981 CDD STKc_CK1_delta_epsilon 530 804 - -
Lele08g1218 981 ProSitePatterns Serine/Threonine protein kinases active-site signature. 646 658 IPR008271 GO:0004672|GO:0006468
Lele08g1218 981 MobiDBLite consensus disorder prediction 822 856 - -
Lele08g1218 981 ProSitePatterns Protein kinases ATP-binding region signature. 537 560 IPR017441 GO:0005524
Lele08g1218 981 MobiDBLite consensus disorder prediction 888 981 - -
Lele08g1218 981 Pfam Protein kinase domain 532 749 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g1218 981 MobiDBLite consensus disorder prediction 903 964 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1218 Lele-ChrLele08 7664536 7674326 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1218 388 442 GRAS Transcription Factor Family AT3G54220 45.455 1.25e-06 50.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Lele08g1218 Pkinase 1.3e-25 CL0016
TF GRAS Lele08g1218 Pkinase 1.3e-25 CL0016