Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1183 ATGGACACAAAATATGGTGAATCTATTGATGATCAGGGCTCGTTGCCAATCATGGCCCTGCAGCAGTTGTCTGAGGGGGTTATCGATGTTGGAGGGGAAGTATTGCATAGTGAGAAGACTGCCGTTTCACCCAAGGTGCCTCCTAGACATAGACGCTGTCAAAGTGAAGTTGTGACCGCAGGACTTCAAAGGAGTGATAGCTATAAGAAGTTGAAGAATCATGTGCAGAAGGCTTGGCGGACAGGAAGCAAATCCCGTGAAGAATGTTCCCATTTGACTTTTAACCCTGAGGTCTTAGCGAACCAAAAGCGTCAGTGGTATCAGCTTAATTCCAAAACCCTGGATTGTGCAAATTATAACGAGCCAGCCTCGCTGTTTGAACATTTTGTGATTGTTGGGCTGCATCCAGATGCAAATCTGGAAGATGTGGAGGTTGCATTTGCAAATAGGAAGAAGTGGGAAAAAGAGGGAAAATATGCGCCTGTAGAGTTCCAAACGATGCAGCGACAGAAGTCTCCAGTACCAGCAGTGTTGGAGCCTCAGATTCTCTTCAAATATCCTCCTGGGAAGAAACTGACCATGCGCATGATGGATTTAGCCTCTTTTTGCTTTCCCGGAGGTGTTAAGGCATCATTGTTGGAGAGGACTCCATCTCTAAGTGAACTGAATGAACTTGTGTATGGACAGATTCATTTAGGCAGGGATGATTTATCATTTATATTTTCACTGAAGGCAGCAGAAAATGCAACTCTCTACGGGGTTTGTCTACATGTGCCTGAAATCTTACAACGGCCACCTAGTATCTTAGGCATATCGTCTCCTCTCACTCTTCCCTCTGGGGCGTGCAGCCGTTTTATGGTTTCTGCTCCTCGTTGTTTCTGTCTGCTGACTAGAGTTCCTTTCTTTGAGTTGCATTATGAAATGTTAAACAGTCTTGCTGCACAGGAACGTCTGAATCGGATAACTCAATTTGTAAATGAAATGACTCTTACCGGTTCTTTTCTACCACCTAAACTAGATGATCAAACAAATGAAAATGATGACACCCTAGAGAGGGAATCTTTTAGTGATTGGATGGCTTGCGCAATACCTGTTAAAGATGCAGCAGTGCTTGCTGCTGCTGCTGCAGGAATTATACCTGATGATGAAATCTCAGCCAAATTATGGGATCCTGAGTCCCCAGGAAGTATGACCCCCAGTGATGCTTCTGATATTGGCCAGGTCAGGGATGTAGATAAGGATGGAAATAAGAGGCATGATGATTGTGCTTCTGATGTACCACAAACCTATCCAAATTCTTTGGAAAGGATGTCTGGAAGCTATGAAGATGGTCATGCTTCTCCAATTGTTGGAACAACTCATTCTTCTAGGAGTCGTGCATTGAAGCATCTTGGGAGTTCTCAGTCACCTTTCAGGAGTCCAATCATAAGCATGGCATCAGAAGATGAGGACGATCTTTTTGCAAATAATGATGATGATGGGGATGATTTTTTAATGGAATGGGCTAGGGAAAATAAGAATGATTTGCTATTGATAGTGTGTCGATATCATGATCTACCTCTTCCACGTCGGGGAAGTGAAATTATTTTCCATCCTCTGGAACATCTACAGCCTATTTTGTATAGAAGGCCACCAGTTGTTGCTCTTGGCTTTCTTGAAAATTGTTTAAATTGTTATGAACCTGCTAAGGTAAATGCAAAGTTGGCTGCTGCTGAGGAAGCTCTTGCACTTTCTATATGGACAATTGTTACTATTTGTCGAGTTATGTCCCTTGAAAATCTGGTGGCATTAATTGCAGGAGTGTTGTTGGAAAAACAGGTGTTACTAGAGTGTCCAAATCTAGGTGTTCTATCTGCTGTAGTGCTATGTGTTATTCCCATGATTCGTCCGTTTCAGTGGCAGAGTTTGTTTCTCCCTGTTCTACCCCAGAGAATGTTTGATTTTCTTGATGCACCAGTTCCGTATATTATTGGCATACAGCATAAGCCCGCTGATTTGAAAATAAGAACTGCTAATCTTGTTCATGTTAATTTACTTAAGGATCAGGTCAAAGTGTGTTATATGCCAAGACTTCCACGGCATAGAGAACTCATCTCTGAGTTAGGTCCATTTCATGCTAGACTTTCAAGTGAAAGTTCAATTGCTGAAAAGAGTCCTGTATATAGGTGCAACGAAGTCCAGGCTGAAGCCGCAACCCAGTTTTTGGATGTCGTGTGGAGATACATGGAGTCACTTTGTTCAGATATGAGGTTACACACGATCACTAATGTACAGTCAAATAGTGATAGGGTTTCTTTGCTCCTTAAAGATAGCTTTATCGATTCTTTCCCTAGCAGGGACCGACCATTCATTAAGCAATTGGTTGACACACAACTCTTCAGTGTTCTGTCAGACTCGCGTCTATCAAGCTTCGAGAATGACTCATATTTGTCTGACGCTTCAATCTAA 2448 0.4261 MDTKYGESIDDQGSLPIMALQQLSEGVIDVGGEVLHSEKTAVSPKVPPRHRRCQSEVVTAGLQRSDSYKKLKNHVQKAWRTGSKSREECSHLTFNPEVLANQKRQWYQLNSKTLDCANYNEPASLFEHFVIVGLHPDANLEDVEVAFANRKKWEKEGKYAPVEFQTMQRQKSPVPAVLEPQILFKYPPGKKLTMRMMDLASFCFPGGVKASLLERTPSLSELNELVYGQIHLGRDDLSFIFSLKAAENATLYGVCLHVPEILQRPPSILGISSPLTLPSGACSRFMVSAPRCFCLLTRVPFFELHYEMLNSLAAQERLNRITQFVNEMTLTGSFLPPKLDDQTNENDDTLERESFSDWMACAIPVKDAAVLAAAAAGIIPDDEISAKLWDPESPGSMTPSDASDIGQVRDVDKDGNKRHDDCASDVPQTYPNSLERMSGSYEDGHASPIVGTTHSSRSRALKHLGSSQSPFRSPIISMASEDEDDLFANNDDDGDDFLMEWARENKNDLLLIVCRYHDLPLPRRGSEIIFHPLEHLQPILYRRPPVVALGFLENCLNCYEPAKVNAKLAAAEEALALSIWTIVTICRVMSLENLVALIAGVLLEKQVLLECPNLGVLSAVVLCVIPMIRPFQWQSLFLPVLPQRMFDFLDAPVPYIIGIQHKPADLKIRTANLVHVNLLKDQVKVCYMPRLPRHRELISELGPFHARLSSESSIAEKSPVYRCNEVQAEAATQFLDVVWRYMESLCSDMRLHTITNVQSNSDRVSLLLKDSFIDSFPSRDRPFIKQLVDTQLFSVLSDSRLSSFENDSYLSDASI 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1183 815 Gene3D - 579 743 IPR043153 -
Lele08g1183 815 PANTHER DENN DOMAIN-CONTAINING PROTEIN 2 61 806 - -
Lele08g1183 815 ProSiteProfiles Tripartite DENN domain profile. 162 807 IPR037516 -
Lele08g1183 815 MobiDBLite consensus disorder prediction 386 432 - -
Lele08g1183 815 SMART DENN_cls 288 681 IPR001194 -
Lele08g1183 815 MobiDBLite consensus disorder prediction 406 424 - -
Lele08g1183 815 Pfam DENN (AEX-3) domain 583 679 IPR001194 -
Lele08g1183 815 Pfam uDENN domain 180 258 IPR005113 -
Lele08g1183 815 Gene3D - 114 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1183 Lele-ChrLele08 7466075 7475286 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g1183 08 7466075 7475286 Lele13g1879 13 26633010 26636438 CCT
Lele08g1183 08 7466075 7475286 Lele14g1816 14 24973621 24986104 CCT
Lele08g1183 08 7466075 7475286 Lele15g0530 15 3094996 3098046 CCT
Lele08g1183 08 7466075 7475286 Lele16g0546 16 3034691 3036694 CCT
Lele08g1183 08 7466075 7475286 Lele08g1183 08 7466075 7475286 ECH
Lele06g1189 06 7471130 7480201 Lele08g1183 08 7466075 7475286 hybridization