Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1174 ATGGAGAACGTGTTTCGCTTAGTTGATCCTGAAGACTTGTTCTCTCGGCGCTGCATTTGGGTGAACGGCCCTGTGATCGTCGGAGCAGGCCCCTCCGGCCTCGCCACGGCGGCTTGTCTCAGAGAACAAGGCGTGCCGTTCGAGGTTCTCGAGCGAGCCGACTGCATAGCTTCTCTCTGGCAGAAGCGAACCTACGACAGGCTCAAGCTTCACCTTCCTAAGCAATTCTGTCAGCTCCCCAAAGTTCCATTCCCAGACGACTTCCCTGAGTACCCTTCAAAGCGACAATTCATCGACTACCTCGAATCATACGCCAAGCAATTCCAGATCAACCCACGATTCAACGAGTGCGTTCAATCCGCCAGGTACGATGAGACCTGCGGTTTGTGGCGGGTCAAGACCGTTTCCACCTTCGGCTCCACTCGAACTGAGGTCGAGTACATTTGCCGATGGCTCGTGGTGGCCACCGGCGAGAATGCCGAGTGTGCCATGCCAGATATCCAAGGCTTGGGTGAATTCAAAGGTGAAATCATTCATGCCTGTGATTACAAGTCAGGCGAAAATTTCAGGGGAAAGAAAGTGCTCGTGGTGGGGTGTGGCAATTCCGGCATGGAGCTCTCTCTCGACCTCTGTAACCACAATGCGTCACCTTCAATGGTTGTTCGTAGCTCTGTCCATGTATTACCCAGAGAGATTTTCGGAAAATCAACGTTCGAATTGGTCGTTATGATGTCGAAGTGGCTACCTCTCTGGTTCGTGGACAAGCTCCTATTGGTTCTTGCATGGTTGGTGCTCGGAGACGTTGAGAAATATGGGCTAAAACGGCCATCGGCGGGCCCACTGGAGCTGAAAAACGCAAAGGGGAAGACCCCTGTTTTGGACGTTGGAACATTGGAGAAGATTAGATCCGAAGACATAAAAGTTGTACCAGGAATCAAAAGATTTAACAATCACCAAGTTGAACTAGTCAATGGTGAAACACTCGATATTGATGCAGTTGTTCTAGCCACAGGATATCGCAGCAATGTCCCTTCATGGCTTCAGGAAGGTGAATTTTTCTCAAAGAATGGATTCCCAAAGAGGCCATTCCCACATGGATGGAAAGGAAGTGTTGGTCTTTATGCAGTTGGGTTTACAAGGAGAGGGCTATCTGGTGCTTCATCTGATGCCATGAAAATTGCTCAAGACATAGGCCAAGTTTGGAAGGAAGAAACTAAGCAAAAGAAGCATAGACCTACTGCTTGCCATAGACGATGCATTTCCCAGTTCTAA 1272 0.4961 MENVFRLVDPEDLFSRRCIWVNGPVIVGAGPSGLATAACLREQGVPFEVLERADCIASLWQKRTYDRLKLHLPKQFCQLPKVPFPDDFPEYPSKRQFIDYLESYAKQFQINPRFNECVQSARYDETCGLWRVKTVSTFGSTRTEVEYICRWLVVATGENAECAMPDIQGLGEFKGEIIHACDYKSGENFRGKKVLVVGCGNSGMELSLDLCNHNASPSMVVRSSVHVLPREIFGKSTFELVVMMSKWLPLWFVDKLLLVLAWLVLGDVEKYGLKRPSAGPLELKNAKGKTPVLDVGTLEKIRSEDIKVVPGIKRFNNHQVELVNGETLDIDAVVLATGYRSNVPSWLQEGEFFSKNGFPKRPFPHGWKGSVGLYAVGFTRRGLSGASSDAMKIAQDIGQVWKEETKQKKHRPTACHRRCISQF 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1174 423 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 25 417 - -
Lele08g1174 423 Pfam Flavin-binding monooxygenase-like 26 344 IPR020946 GO:0004499|GO:0050660|GO:0050661
Lele08g1174 423 PRINTS Pyridine nucleotide disulphide reductase class-II signature 189 213 - -
Lele08g1174 423 PRINTS Pyridine nucleotide disulphide reductase class-II signature 23 45 - -
Lele08g1174 423 FunFam Flavin-containing monooxygenase 24 406 - -
Lele08g1174 423 Gene3D - 24 407 IPR036188 -
Lele08g1174 423 SUPERFAMILY FAD/NAD(P)-binding domain 25 294 IPR036188 -
Lele08g1174 423 SUPERFAMILY FAD/NAD(P)-binding domain 191 401 IPR036188 -
Lele08g1174 423 PRINTS FAD-dependent pyridine nucleotide reductase signature 24 43 - -
Lele08g1174 423 PRINTS FAD-dependent pyridine nucleotide reductase signature 193 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1174 Lele-ChrLele08 7379527 7381127 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g1174 08 7379527 7381127 Lele13g1869 13 26541017 26544711 CCT
Lele08g1174 08 7379527 7381127 Lele14g1809 14 24897685 24901379 CCT
Lele08g1174 08 7379527 7381127 Lele15g0540 15 3189373 3193064 CCT
Lele08g1174 08 7379527 7381127 Lele16g0553 16 3117734 3121428 CCT
Lele08g1174 08 7379527 7381127 Lele08g1174 08 7379527 7381127 ECH
Lele05g1323 05 8277420 8279016 Lele08g1174 08 7379527 7381127 hybridization
Lele06g1183 06 7383107 7399032 Lele08g1174 08 7379527 7381127 hybridization