Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1136 ATGTCTTTTCATGATCAGGAATCTTGGATGGCAAAAACTGCTGGGAGTTTAAATGATGGTTACATGACTTGCAACAATTCCTCTAGAGTGGAGTCCAAGCGTTTTCATCAGTGGCTCATGGATAGCCCTGAAGGGGATCTGTTTCCACTAAAGAAACAAGCAGTAGAGGTTTCAAGCAATAATTTGTTATCAGGAATGTATGGCACCGATAACCATTCATGGGGAAATTCCTCAAGTTTACACTCATTCAATGGTCATTTTTCTGAACAATTATATGACCCAGACGCTTCAGCAAGGGCTTTGAGTTGTGAAAACAGGAATATTTCCCCTGTTAATACAGATAAATTGACTGTGGGACAGAAGGATATCATGGAAGCTTTTGGGAGCGATTCCTCATTCCTAACCCAGACAATTGATGATCATGGATCAGTTATAAATTACGGTGGAATTAGAAAAGTTAAAATTAGTGAGGTGAAGGATTCTGAGAATGTCGTGTCTGTTCCTCCAGGTCATACCTATGATATGGGAGTGAACAACACTGTGTCAAATACGCGTGTGCACACGGGGGTTGATTATCCCACATCAACAAATCTTGCTGGAGACAAAGGAGATGAGAATATTGTGTCGTTGGATGATGATTATGGCAGGGCATACAACAATTTCATTTCAGTACGTCAATCTTACAGCAAGGGAGATGATGGCTTATCTGTAGGTCTAACCTACAAGGAGACTTGTAATACAATAACAATGGGCCAGGCATTCGGCAAGGAGGATAGTAATATGATAGCTATTTCTCAAGCTCATAATAAGGCAGAGGATAATTCTATTTCAAGACACGACATATTTAATAGGGGGGAGGATGGCACCATGTCAGTGAATCATGCCTACCACCAGGATAGAAGTAACAAGTTATCAATTGCTTGCTCTTATAACAGTGGAGAAAGCACAATTATATCCTTCGGTGGATGTGATGATGATTATGGTCATGTTAGTATAACTCCCTCTGGCAGACTTATATCCAACTATGAACTCTTGATGGGCCAACCAACTAGACAGAGATCAGAAGCTGTGAATGAGAAAGAATTGATTATTTCTAATTCTGGCTCACTACTTAGTGCCTCCTTGACATCTGCTTCTGGAACTGGAAATGTTTCCCAGACAAAAGAGGAATCTAAAACATCTAAGAAATTTCCTTCAAATAACTTCCCTTCTAATGTCAGAAGTTTGCTGTCCACTGGCATGCTGGATGGAGTCCCTGTGAAGTATATGGCCTGGTCACGGGAGGTTATTAATGCATATGAATTTGAGCGTCATGCTGGTCACAAGACGAAGCACCCCAATAATCACATTTACTTTGAAAATGGGAAAACTATATATGGGATTGTTCAGGAGCTCAGGAGCACCCCACAAAATATGTTGTTTGATGTTATTCAGACAATAACTGGTTCGCCAATCAATCAAAAATCCTTCCGCATTTGGAAAGGTGGTGCAATTTATGTTACTGTAGTGTTGCAGATTTTTTTATTTGATCTTCATAATTTTTGTTTGGTGTGA 1554 0.3996 MSFHDQESWMAKTAGSLNDGYMTCNNSSRVESKRFHQWLMDSPEGDLFPLKKQAVEVSSNNLLSGMYGTDNHSWGNSSSLHSFNGHFSEQLYDPDASARALSCENRNISPVNTDKLTVGQKDIMEAFGSDSSFLTQTIDDHGSVINYGGIRKVKISEVKDSENVVSVPPGHTYDMGVNNTVSNTRVHTGVDYPTSTNLAGDKGDENIVSLDDDYGRAYNNFISVRQSYSKGDDGLSVGLTYKETCNTITMGQAFGKEDSNMIAISQAHNKAEDNSISRHDIFNRGEDGTMSVNHAYHQDRSNKLSIACSYNSGESTIISFGGCDDDYGHVSITPSGRLISNYELLMGQPTRQRSEAVNEKELIISNSGSLLSASLTSASGTGNVSQTKEESKTSKKFPSNNFPSNVRSLLSTGMLDGVPVKYMAWSREVINAYEFERHAGHKTKHPNNHIYFENGKTIYGIVQELRSTPQNMLFDVIQTITGSPINQKSFRIWKGGAIYVTVVLQIFLFDLHNFCLV 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1136 517 MobiDBLite consensus disorder prediction 375 399 - -
Lele08g1136 517 PANTHER AUTOIMMUNE REGULATOR 10 457 - -
Lele08g1136 517 Pfam Tify domain binding domain 427 465 IPR032308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1136 Lele-ChrLele08 7140648 7143686 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1136 383 495 PHD Transcription Factor Family AT3G53680 45.588 3.78e-29 120