Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1133 ATGAGCATTGAAGCCCCCGTGAAAAGTTCGTCCGTTTCATTCTTGGACAGAAAAGAGACTGGGTTTCTCCATTTCGCCAAGTATCACGGACTCGGCAATGACTTCATTTTGATTGACAACAGAGACTCTCTAGAGCCCAAGATCAGCTCAGATAGAGCTGTTGAACTATGTGATCGTAACTTCGGGATTGGTGCTGATGGAGTTATTTTTGTCATGACTGGCACCAATGGCGCTGACTATACCATGAGAATCTTCAATTCTGATGGTAGTGAGCCTGAGGCGATCTCTCTTTCCTCAAAAATCGTTGAGGATGGAAATGTCAGAGTTGACATGGGGGAGCCAATTCTTAAAGCGTCAGATGTGCCTACTACATTACCTGCAAATAAGGATCAATCAGTTGTTAAGGCAGAGCTAGATGTAGATGGAGTTATCTGGAATGTAACATGTGTTAGCATGGGAAATCCACATTGTGTAACATTTGGTACTAAAGAAAGTCAGAATATATTGGTCGATGATTTGAATCTAGCAGAAATTGAATTTGTCCAAGTTCTGTCAGATGGTCACCTAAAGATGCGTGTTTGGGAGCGTGGAGCAGGAGCGACTCTAGCCTGTGGAACTGGAGCTTGTGCTTTAGTTGTGGCAGCAGTTCTCGAGGGTTGTGCCAAGAGGATTTGCAGGGTTGATCTACCCGGAGGGCCATTGGAGATTGAGTGGAAGGAGGAGAATAATCATGTGTATTTAACGGGCCCTGCTGAAGTAGTTTTCTACGGATCTTTACCCCTTTAA 786 0.444 MSIEAPVKSSSVSFLDRKETGFLHFAKYHGLGNDFILIDNRDSLEPKISSDRAVELCDRNFGIGADGVIFVMTGTNGADYTMRIFNSDGSEPEAISLSSKIVEDGNVRVDMGEPILKASDVPTTLPANKDQSVVKAELDVDGVIWNVTCVSMGNPHCVTFGTKESQNILVDDLNLAEIEFVQVLSDGHLKMRVWERGAGATLACGTGACALVVAAVLEGCAKRICRVDLPGGPLEIEWKEENNHVYLTGPAEVVFYGSLPL 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1133 261 FunFam Diaminopimelate epimerase chloroplastic 116 248 - -
Lele08g1133 261 SUPERFAMILY Diaminopimelate epimerase-like 23 122 - -
Lele08g1133 261 Pfam Diaminopimelate epimerase 176 253 IPR001653 GO:0008837|GO:0009089
Lele08g1133 261 Pfam Diaminopimelate epimerase 25 94 IPR001653 GO:0008837|GO:0009089
Lele08g1133 261 Gene3D Diaminopimelate Epimerase; Chain A, domain 1 1 96 - -
Lele08g1133 261 PANTHER DIAMINOPIMELATE EPIMERASE, CHLOROPLASTIC 98 260 IPR001653 GO:0008837|GO:0009089
Lele08g1133 261 Hamap Diaminopimelate epimerase [dapF]. 23 261 IPR001653 GO:0008837|GO:0009089
Lele08g1133 261 Gene3D Diaminopimelate Epimerase; Chain A, domain 1 112 251 - -
Lele08g1133 261 SUPERFAMILY Diaminopimelate epimerase-like 137 259 - -
Lele08g1133 261 TIGRFAM DapF: diaminopimelate epimerase 99 259 IPR001653 GO:0008837|GO:0009089
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1133 Lele-ChrLele08 7097294 7099873 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1279 05 7964074 7968734 Lele08g1133 08 7097294 7099873 hybridization
Lele06g1141 06 7092034 7101836 Lele08g1133 08 7097294 7099873 hybridization